Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4101 ATGGGTTTTCGTTTACCAGGTATCAGAAAGGCATCATTTACTGTAAACCAAGCATCTTCAAAAACTGTGGATGTGCCGAAGGGCTATCTTGCGATATATGTTGGAGAGAAGATGAAGAGGTTCGTGATCCCCATATCATACTTGAGCCAAACTTCATTCCAAGACTTGTTGATACAAGCCGAGGAACAATTTGGGTATGATCATCCAATGGGTGGTCTCACAATTCCTTGCGGAGAAGACATGTTCTTAGATATCACTTCTCGCTTGAATAGGTGCTAA 279 0.4194 MGFRLPGIRKASFTVNQASSKTVDVPKGYLAIYVGEKMKRFVIPISYLSQTSFQDLLIQAEEQFGYDHPMGGLTIPCGEDMFLDITSRLNRC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4101 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Lja3g4101 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Lja3g4101 92 Pfam Auxin responsive protein 15 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4101 Lja-Chr3 80446576 80446854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4101 14 82 Calmodulin-binding Proteins AT3G43120 50.725 6.81e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4101 K14488 - gmx:112998524 162.925