Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4100 ATGAATTTCACCTTAGCAACGGCTCCAACTATATGTGGGGACAGGCTAGGTAACCTCATTTTTGAAGTTGGTAATAACTTTGCTGTATTCACTGGGATGGTGATTACCAGCAACAGTTTGCATTTTGTTCTAAAGCATTATGCACAACCTCGCATCACTTCTGACATTATTGTGGGACTAATTGCGGGCAACATAAGATTTGTTCATAAGCTTGTTGAGAAATTCAACAAATCTTTTGGATTCATCATTGATTTTGGCATGATGTGTTACATGTTCGCATTGGGCATAGAAATGGATCCTTTCTTTCTCTTGGAACGACCACGCAGGCAAGCTAAAGTTGCATATGCAGGAGTTATCTCAACTTTCCTCCTATCAGTTATTGTAACCCCACTGCTGATGTTCTTCCAAGGGGAAAACAAGCTTCTAGAATTCACATTCTTCCTCTCTTCTCTTGTTGCTAGCACAAGCTCCCCAGTCCTGACCCGTTTGATAACTCACCTCAAAATTGGGAAATCAGATATTGGGAAGCTTGTGATTGCAGCAGGGATGCACTCAGATTTCTTGAGCGCTTTGATTTTTTCTTTCGGCTACATCTTGGTTCCGTTGCCTCAAGTGTGCAACGACATGGAGAAAGATATTAGCCTTAAAGAGACCATTACCATGGGTGGTGCTGTTTTAGGGCAGGTAGTGTTCACAGCATTGGCTTCACCGTGTTTCATGAAGTGGGTTAACAATGAAAACCCTGAAGGAAGAGCCATGAAAGGTCCACATGTTGTGCTGTCAATTGCATTCTTGGTGTTAATGTGTGCCTCCTCCACTATGTATGATTATAGTCCCATTTTCAGTGCTTTCTTGGTAGGGGTTTGTGTCCCTAGAGAGGGTAGAGTTTCTAAGTGGCTGATCACCAAAATCAACTACATGTTGACCACTATTTTCTTTCCTATTTTTTTCTTGTGGGTGGGGTATGAAGCTAATTTCAGTAAGTTTGAGATTCGTTCCGCCGAAACATGGTTACAATTACTTGCATTTATGGTAGTGGTAGTGTCTGGAAAAGTTATTGGGACAATAGTTTCTGGGGCAATACTGGGCTTTCACTTGCCTGAATCAGTTGTAACAGGATTGCTCCTCACCACCAAGGGCCACTTGCATATCTATTTAGCTATCAAAGTGATGAGTTGTGGTGCTACAACTGTTTCCACAGGCATTGTGATCATAATTTCAATCTTTTTCACAATTGTGCCAGCCCCAGCAATTGTGGCACATATCATAAAACGTGCAAGGAAAAGGGCACCTACTCATCGCTTGGCCCTTCAATTGCTTGATCCCTCAACTGAGCTAAGGATCCTCCTCTGTGTTCAGGGACCTCAAAATGTTCCTGCTTCCATCAACTTCTTGGAGATTTCAAAAGGGGCAGCAGACGCTGGTGTTCTGGTATATGTTGCAGACATGATTGAACTCACCGATGAAATATCAGCCACGTTAGATAAGGATGAACGAGTGCACACAGCCACTGTCAAAGACAAGCAAATCATGGACATGAGGGAGAACATAACCAGCTCATTCCAAACCTATGTGGTAGACAGTGACAGCAGAATCACACTCAAAAGAACCATGGCACTCTCAACAATCAATAACATGCCACAAGACATTTGTGTTTTAGCAGAGGACTTGATGATTGCCCTCATTGTACTGCCATTTCATAGGAGCCAGCATAAGGAAGGAACACTGGATGGTGGTAATCAAGGATTTAGATATGTTAACCGAAAGGTACTGAGAAGTGCCCCTTGTTCAGTTGGTATTCTAGTAGACAGAGGCCTTGGAACCGAGCGTGTATCAAGATGTCAAGAAGCACTAAATGTGGCAGTCATATTCATCGGTGGAAAAGATGACAGGGAAGCACTTTCCTACGCTGGCCGCATCTCACACCATCCAGGAGTGAAGCTCACAGTCATAAGATTCCTGGTAGAAAGCAGTGTAGAAGCCTCAAGACTAGCCGGGTACAGGATCATAATCCCAGAGCAGGAGAAAGATACAAAGTTGGATAATGAGTTCTTTGCACAGTTCTACGAAAATCACGTTTCTGGGGGTCATATTTCCTATGTGGAGAAGCATCTTGCTAATGCTGCTGAGACATTCTCCATTCTCAGGTCGTTTGAAGGGAAATACTCGTTGGTCATTGTGGGAAGGGAAGGTGGAGTGAACTCTATTTTGACAAAGGGCATGAATGATTGGCAGCAGTGCCCGGAACTGGGGCCAATAGGAGATGTTCTTTCAGGACCAGACTTCTCATTGACTGTCTCTGTATTGATCATCCAGCAACACAGAGTCAAAGGAGAAATAGATGGGTTAGATGATGACTTCTCTATCATATAA 2373 0.4332 MNFTLATAPTICGDRLGNLIFEVGNNFAVFTGMVITSNSLHFVLKHYAQPRITSDIIVGLIAGNIRFVHKLVEKFNKSFGFIIDFGMMCYMFALGIEMDPFFLLERPRRQAKVAYAGVISTFLLSVIVTPLLMFFQGENKLLEFTFFLSSLVASTSSPVLTRLITHLKIGKSDIGKLVIAAGMHSDFLSALIFSFGYILVPLPQVCNDMEKDISLKETITMGGAVLGQVVFTALASPCFMKWVNNENPEGRAMKGPHVVLSIAFLVLMCASSTMYDYSPIFSAFLVGVCVPREGRVSKWLITKINYMLTTIFFPIFFLWVGYEANFSKFEIRSAETWLQLLAFMVVVVSGKVIGTIVSGAILGFHLPESVVTGLLLTTKGHLHIYLAIKVMSCGATTVSTGIVIIISIFFTIVPAPAIVAHIIKRARKRAPTHRLALQLLDPSTELRILLCVQGPQNVPASINFLEISKGAADAGVLVYVADMIELTDEISATLDKDERVHTATVKDKQIMDMRENITSSFQTYVVDSDSRITLKRTMALSTINNMPQDICVLAEDLMIALIVLPFHRSQHKEGTLDGGNQGFRYVNRKVLRSAPCSVGILVDRGLGTERVSRCQEALNVAVIFIGGKDDREALSYAGRISHHPGVKLTVIRFLVESSVEASRLAGYRIIIPEQEKDTKLDNEFFAQFYENHVSGGHISYVEKHLANAAETFSILRSFEGKYSLVIVGREGGVNSILTKGMNDWQQCPELGPIGDVLSGPDFSLTVSVLIIQQHRVKGEIDGLDDDFSII* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4100 790 Pfam Sodium/hydrogen exchanger family 43 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja3g4100 790 PANTHER CATION/H + ANTIPORTER 11 787 - -
Lja3g4100 790 PANTHER CATION/H+ EXCHANGER 3 11 787 - -
Lja3g4100 790 Gene3D - 27 432 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4100 Lja-Chr3 80438295 80442549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4100 1 790 Antiporter Super Family AT3G52080 45.936 0.0 733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4100 3 80438295 80442549 Lja3g4100 3 80438295 80442549 ECH