Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4097 ATGGAGTTCCTAAGTTCCATCCTCCTCCTTGGGTTGACATTCATTCTCACACAAGCTCTGTATTCAAGAATCACAAAAACAAACTACAAGCTCCCACCAGGACCTTACCCTCTCCCCATTATTGGAAACCTCCTTGCACTTGGTAACAATTCTCACCGATCCTTAGCCAAACTCGCCAAGCTTCATGGCCCCATCATGACCCTAAAACTTGGTCAAGTAACCACCATAGTTGTCTCTTCACCTGAAATGGCCAAAGAGGTTCTCCTCACCCACGATAACACCTTGTCGAACCGATCTGTTCCCCAAGCGATTCAAGTTCATGAAACCGACAATCACAGCATGGCCTTCATGCCTGTCTCGCCTCTCTGGCGAGACTTGAGGAAAATAAGCAACGCTCATTTATTCTCGCCCAAGAGTCTTGACGCGAGTCAACACCTCAGGCGTGAGAAGATGCAAGAGCTTCTCCACGATATCCACCGCTACAACGTTGCTGGCGAAGCAATGGATATTGGAAAAGAAGCTTTTAAGACGGGTGTGAATATGATGTCAAACACTGTTTTCTCTGTGGATTTGATCTCTTCTTCTGATTCAGCCGGAGATTTCAAGGATTTGGTGATGAGTATCATGGAAGTTACTGGGACGCCAAATTTGGCTGATTTCTTTCCTGTACTCAGGATGCTTGACCTGCAGGGACTCAAGAGTCGAAACTTTCTTTCTGTTGGGAAGGTCTTAGACATCTTACGTGGTTTGATTGATCAAAGGGTGAAGGTTCGGGAACTCAAAGGTGTTGACACCCACATGGACATGCTGAATTCCTTGCTTAACATTGCTGATCAAGGGAATAGCGTGATGAACAAATTTGAAATTGAACTTTTATCTCTGACTTTATTTGTTGCTGGGACGGACACAGTTACATCTTCGCTTGAATGGGCAATGACCGAACTACTCCTAAATGAAAATGCAATGTCAAAAACAAAACAAGAGCTTGAGCAAATCATTGGTAAAGGTAAACTTGTTGAGGAATCAGATATTGCTAGGCTTCCTTACTTGCAAGCAGTGATAAAGGAGAGTTTGCGTTTGCACCCTCAAGCCCCTCTTTTAATCCCTAGGAAGGCCAATGCAAATGTGGAAATTGGTGGCTACACAATCCCCAAAGATGCACAAATCTTCGTTAACCAGTGGGCTATTGGCAGAAACTCAAGTGTTTGGGAAAATGCAAATTTATTTTTACCAGAAAGGTTCTTAGGCTCTGATATTGATGTTAAAGGTCACAATTTTAAGTTTATACCATTTGGCTCTGGGCGTCGAATTTGTCTTGGCCTACCACTAGCAATGAGGACCTTGTATTTGATGTTGGGTTCACTAATCAATTGTTTCAACTGGAGCCTTGAAGATGGAACAACCGTAGATAATATGAACATGGATGAGAAATTTGGGCTAACCTTAGTAAAGGCTCAACCACTCAGAGTCATTCCACAGGAAATAAGCAATTAA 1494 0.4317 MEFLSSILLLGLTFILTQALYSRITKTNYKLPPGPYPLPIIGNLLALGNNSHRSLAKLAKLHGPIMTLKLGQVTTIVVSSPEMAKEVLLTHDNTLSNRSVPQAIQVHETDNHSMAFMPVSPLWRDLRKISNAHLFSPKSLDASQHLRREKMQELLHDIHRYNVAGEAMDIGKEAFKTGVNMMSNTVFSVDLISSSDSAGDFKDLVMSIMEVTGTPNLADFFPVLRMLDLQGLKSRNFLSVGKVLDILRGLIDQRVKVRELKGVDTHMDMLNSLLNIADQGNSVMNKFEIELLSLTLFVAGTDTVTSSLEWAMTELLLNENAMSKTKQELEQIIGKGKLVEESDIARLPYLQAVIKESLRLHPQAPLLIPRKANANVEIGGYTIPKDAQIFVNQWAIGRNSSVWENANLFLPERFLGSDIDVKGHNFKFIPFGSGRRICLGLPLAMRTLYLMLGSLINCFNWSLEDGTTVDNMNMDEKFGLTLVKAQPLRVIPQEISN* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4097 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Lja3g4097 497 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 Gene3D Cytochrome P450 19 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 496 - -
Lja3g4097 497 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 496 - -
Lja3g4097 497 SUPERFAMILY Cytochrome P450 32 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4097 497 Pfam Cytochrome P450 32 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4097 Lja-Chr3 80389997 80393711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4097 3 492 Cytochrome P450 AT2G45550 44.646 4.19e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4097 - - lja:Lj0g3v0208479.2 726.857