Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4096 ATGGAGTACCTAAGTTCCATCCTCCTCCTTGTGTTGACATTCATTCTCACACAAGCTGTGTATTCAAGAATCACAGGCAGCACCAAACCAAAGTACAAGCTTCCACCAGGACCATACCCTCTCCCCATCATTGGAAACATCCTTTCACTTGGCCAAAAGCCCCACAAGTCCTTAGCCAAACTCGCCAAGGTTCATGGCCCCATCATGAGCCTAAAGCTTGGTCAAGTAACCACCATAGTTATCTCTTCACCTGACATGGCCAAAGAAGTTCTCCTCACCCACGATAACTCTTTGTCGAACCGAGTCATTCCGCAAGCACTTGAAGTCCACGATCTCCACAAACACAGCATAACTTTCCAACCGATTTCGCCTCTATGGCGAAACCTGCGGAAGATATGCAAGGACCAGTTGTTCTCCAACAAGAGTCTCGATACGAGTCAAGATCTCAGACGAGAAAAGATGAGGGAGCTCGTTGATGAGATCCACTGTTGCGGCCTGGCTGGCGAGGTGGTGGACCTCGGGAAAATAACTTTTAAAACAGCGATAAACATGTTGTCGAACACGGTTTTCTCGGTGGATTTGGTTCACTCTCAAGGTTCAGCTGGGGATTTCAGGGAGACGGTGATGAGGCTGTTGGAAGATACTGGGAAGCCAAACATGGCTGATTTCTTCCCTGCATTGAGGAGGCTTGACCCGCAGGGTATCAAGAGTCGAAACTCTTTTTCCATTGGGAAGATGTTGGAGATCTTAGGTGGTTTGATTGATCAACGGGTGAAGCTTCGACAACTCCAAGGTTTTGACAACAACATGGACATGTTAAATACCTTGCTTAACATTGCTCATGGGAACAACCAAGACATGAATCCAGCTGAAATTGGACATCTATCTGTGACTTTATTTGCTGCCGGAACGGACACAATTACATCTACACTAGAATGGGCAATGGCAGAACTACTCCGAAATGAAAATGCAATGTCAAAAGTAAAACAAGAGATGGAGCAAATCATTGGCAAAGGTAAACTTGTTGAGGAATCAGATGTTGCTAGGCTTCCTTATTTGCAAGCAGTGTTAAAGGAGACTTTCCGTTTGCATCCTCTAGTCCCACTTTTAATCCCTCGGAAGGCCAATGAAACTGTGGAAATTAGTGGCTACACAATCCCCAAAGATGCAACCATCCTAGTTAATCAGTGGGCTATGGGAAGAAACTCAAGCGTTTGGGAAAATGCAGAGTTGTTTTCACCAGAAAGGTTCGTAGGCTCTGAAATTGATATCAAAGGCCACCATTATCAGCTTACACCATTTGGTGGTGGGCGTCGAATTTGTCTTGGCATGCCACTAGCAATAAGGACATTGTATTTGATGTTGGGCTCATTGATCAATTGCTTCAACTGGAGACTTGAAGATGGATTGACCATAGATGATATTGACATGGAAGACAAATTTGGGCTAACCTTAGTAAAGGCTCAACCAATGAGACTCATTCCACATAAAATAAGCAATTAA 1503 0.4464 MEYLSSILLLVLTFILTQAVYSRITGSTKPKYKLPPGPYPLPIIGNILSLGQKPHKSLAKLAKVHGPIMSLKLGQVTTIVISSPDMAKEVLLTHDNSLSNRVIPQALEVHDLHKHSITFQPISPLWRNLRKICKDQLFSNKSLDTSQDLRREKMRELVDEIHCCGLAGEVVDLGKITFKTAINMLSNTVFSVDLVHSQGSAGDFRETVMRLLEDTGKPNMADFFPALRRLDPQGIKSRNSFSIGKMLEILGGLIDQRVKLRQLQGFDNNMDMLNTLLNIAHGNNQDMNPAEIGHLSVTLFAAGTDTITSTLEWAMAELLRNENAMSKVKQEMEQIIGKGKLVEESDVARLPYLQAVLKETFRLHPLVPLLIPRKANETVEISGYTIPKDATILVNQWAMGRNSSVWENAELFSPERFVGSEIDIKGHHYQLTPFGGGRRICLGMPLAIRTLYLMLGSLINCFNWRLEDGLTIDDIDMEDKFGLTLVKAQPMRLIPHKISN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4096 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 Gene3D Cytochrome P450 20 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 499 - -
Lja3g4096 500 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4096 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Lja3g4096 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4096 Lja-Chr3 80374701 80378653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4096 8 497 Cytochrome P450 AT2G45550 43.373 3.58e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4096 - - lja:Lj0g3v0208479.2 963.755