Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4095 ATGGAGTTCCTAAGTTGTATGCTCCTCCTTGTGTTGACATTCACCCTTACACAAGCTTTGTATTCAAGAGTATTCAGAAGCAGCACAAAACCAAAGTACAAGCTTCCACCAGGACCTGACCCTCTCCCCATCATTGGAAACCTCCTTGCACTTGGCAAAAAGCCTCACCAATCCTTAGCCGACTTGGCCAAGGTTCACGGCCCCATCATGACCCTAAAGCTTGGTCAAGTAACCACCATAGTTGTCTCTTCACCTGACCTTGCCAAAGAGGTGCTCCTCACCCACGATCACTCCTTGTCTGAGTATCGAGCCACTCCTGAAGCAGTTAAAGCTCATGATCACCACAAATACGGCATGGCCTTCATGCCCGTTTCGTCTCGCTGGCGAGAGCTGAGGAAAATATGCAACAGCGAGTTGTTCTCACCCAAGAGTCTTGACACGAGCCAAGACCTCAGACGTGAGAAGCTGCAAGAACTCCTCCATGATATCCACCGTTGCAGCCTTAAAGGTGAAGCAGTGGGTATCGGGAAAGTGGCTTTCAAGAGTGTTATAAATATGTTGTCAAACACTATTTTCTCTTTGGATTTGGCTCGCTCTGCAGTTTCAGCTGGAGATTTTAAGGAGCTGGTGATGAGTATCTTGGAGGATTCTGGGAAGCCGAACTTGGCTGATTTCTTCCCTGTGCTGAAGAGTGTTGATCCGCAGGGCTTGAAGAGTCGAATATCTCATTCTACTGGGAAGATCATTGATATCTTTCATTGTTTGGTTAATCAACGCATGAAGATTCGGGAAGTCCAAGGCTTTGACACGAACAAGGACATGCTAAGTACCTTGCTGAACATTGCTCAAGGGAACAACCAAATGAAAGGAACCCAAATTGAACATTTATCTCTGACTATATTTATCGGTGGAACGGAAACAATTACATCTATGATAGAATGGGCACTCGCAGAACTACTCCAAAATGAAAAGGCAATGTCAAAAGCAAAACAAGAGATGGAGCAAATAATTGGCAAAGGTAAACCCATTGAGGAATCAGATATTGCTAGGCTTCCTTATTTGCAAGCGGTGATAAAGGAAACCTTCCGTTTGCACCCTCCAGTCCCATTTTTAATCCCTCGGAAGGCCAATGCAAACGTGAAAATTTGTGGCTACACAATCCCCAAAGATGCACGTGTTCTAGTCAATGTGTGGGCTATTGGAAGAAACTCAAGCTTTTGGGAAAATGCAAATTTGTTTTCACCAGAAAGGTTCTTAGACTCTGAAATTGATATCAAAGGTCACCATTATGAGCTTACACCATTTGGTGCTGGGCGACGAATTTGTCCTGGAGTACCATTAGCTATGAGGACATTGTATTTGATGTTGGGTTCACTAGTTAATTGTTTTGACTGGAAACTTGAAGATGGAATGTCAATAGATGATAGGGACATGGAAGACAAATTTGGGATAACTTTAGTAAAGGCTCAACCAGTGAGAGTCATTCCACTGAAAATAAGCAATTAA 1506 0.4376 MEFLSCMLLLVLTFTLTQALYSRVFRSSTKPKYKLPPGPDPLPIIGNLLALGKKPHQSLADLAKVHGPIMTLKLGQVTTIVVSSPDLAKEVLLTHDHSLSEYRATPEAVKAHDHHKYGMAFMPVSSRWRELRKICNSELFSPKSLDTSQDLRREKLQELLHDIHRCSLKGEAVGIGKVAFKSVINMLSNTIFSLDLARSAVSAGDFKELVMSILEDSGKPNLADFFPVLKSVDPQGLKSRISHSTGKIIDIFHCLVNQRMKIREVQGFDTNKDMLSTLLNIAQGNNQMKGTQIEHLSLTIFIGGTETITSMIEWALAELLQNEKAMSKAKQEMEQIIGKGKPIEESDIARLPYLQAVIKETFRLHPPVPFLIPRKANANVKICGYTIPKDARVLVNVWAIGRNSSFWENANLFSPERFLDSEIDIKGHHYELTPFGAGRRICPGVPLAMRTLYLMLGSLVNCFDWKLEDGMSIDDRDMEDKFGITLVKAQPVRVIPLKISN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4095 501 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 500 - -
Lja3g4095 501 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4095 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Lja3g4095 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 500 - -
Lja3g4095 501 Coils Coil 316 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4095 Lja-Chr3 80365774 80369830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4095 8 498 Cytochrome P450 AT2G45550 43.888 2.24e-155 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4095 - - lja:Lj0g3v0208479.2 712.99