Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4010 ATGAATTTGCTGACTCAACATGTAACACACCCTCATTTTATCATTTCCTCCGCCTATAAATCCAACCCTTCATTCCATCACCATGTCCAGCTTCATCTTGGTTTGAGTGTGCTTACCCCATTTTCCCAACTGCCCATCATGCCTGTTTCCACTGGAAATGGAAGAATTTTCAGAAGAAGGAAATGGAGCACATTTGTCTCCAATTCTGCAACATCACCAGCTCCATTGCCACCTGACCCAGATAAGGAACAGAAGCAAAAGGGAGAAGGAAGTGATGGTGTGGTTGCAGAGGGTGAGAGTCCTGATCTGCAGACACTTTTTAGAAGATTCTGGAAAGTGGCAGCTCCTTATTGGTCTTCAGATGACAAGACTCAAGCAAGACTGCAGCTTGCTGGTGTTTTTGCTCTCACTCTGGCTACTACTGGAATCAGTGTTGGCTTCAGTTTCTTGGGGAGAGACTTCTACAATTCACTTGCCAACAAGGATCAAGAGCAATTTTCAAAGCAACTACTTTACTACTTGGGTGCCTTTGCTGGAGGAATCCCGTTTTTTGTATTGAGAGATTATGCACGAGAAACTCTTTCTTTGAGATGGAGGTCTTGGATGACAAGGTATTACATGGACCGCTATCTGAAGAACCAGACATTCTATAAACTTCAGTCGCAGTCAATTATTGATAATCCAGACCAGAGAATTGTTGATGATCTAAGTTCTTTCACTGGGACAGCCATTTCTTTCTCCCTGACACTCTTTAATGCTGCTGTAGACTTAATCTCATTCAGTAACATCTTGTATGGAATCTATCCTCCCCTCTTTGTTGTTCTTCTCATATACTCTATTGGTGGGACAGCTATCAGTGTTTACCTTGGAAAGGGACTGGTGACTTTAAATTTCTTGCAAGAGAAAAAGGAAGCAGACTTTCGTTATGGACTTGTAAGGGTGCGGGAAAATGCTGAATCAATTGCTTTCTATGGTGGTGAACAAAGTGAAATGCAACTTCTTCTGCAGCGCTTCAAAAGTGCTTTTGAAAATCTATCTAAACTGTTGATTTCTTCTAGAAATCTGGACTTTTTCACCAGTGGCTACCGCTATGGCATTCAAGTTCTTCCTGCTGCTGTTGTTGCTCCCATGTATTTCTCTGGAAAAATCGAGTTTGGTGTCATCAATCAGTCAGTCTCTGCTTTTAATCATATCCTTAGTGACTTTTCCCTCATTGTGTACCAGTTTCAAGCTATAAGTGCTTTTTCTGCTGTTATTAATCGGTTAGGTGAGTTTGATGATATTTTGGACAGAAGCAACTCCAAATCTCTCTCTGATACTTTGGAAGACATAGAGATTACATACAAAGATATCAGGAGTTCAACTACACTGGAGTCTAATGGATCCACTCCACCAGAAAAATATGAAACGTTACTGGAGATAGAAAATTTGATTCTGAAAACACCAAGCGAATCCACACTTATCAGAGACTTGTCATTGTCAATCAAGGAAAAGGATAATTTACTGGTAATGGGACCAAGTGGAAGTGGCAAGACTTCTTTGTTAAGAGCTATGGCTGGTCTATGGAAAACTGGAACTGGAAAGGTCACGTACTCTGTAAAAGGTGGAGTAGATCCTGAGCAATCCATTTGTTCAGATGTGGATACTCCTGTCATAAAACAATCCATTTGTTCAGATGTGGATACTCCTGTCATAAAAACTTCTAATGACACATATGATGACCGTGGAAAATCCATAAGCAGAAAGTCTAGTATTTTTTTCCTTCCTCAAAAGCCATATATGGTTCTCGGCACACTCCGTCAACAATTACTTTATCCAACTTGGGCAGATGGTTTAGTTTCCGTATCAGACAGTGCTAGTGAAAAAAATGTGCTTCCTTTCTTGACAAACAATCCAAACTCAGATAATATGAGTGATGTGCATATGAAGCCAACTTCCGATGAGCTGATAAAGGTCTTAGAGGATGTTCGTCTTGGCTATTTATTGGCTCGTTTCAGCTTGGATTCAACACATGAATGGTCCAGTGTTCTTTCTCTGGGAGAGCAGCAGCGCCTTGCATTTGCTCGTCTTTTGCTGTCAAAACCTCAATTGATCTTATTGGATGAATCTACAAGTGCACTTGATGAAGATAATGAGGTTCATTTGTACCAAAAGATTGCAGCAGCTGGCATAACATACATCAGTGTTGGCCATCGATCAACCTTATATGACTACCACAGCAAGGTCCTACGCATATCCACACTTGATTCTAAAGATGAACGACCAAATTGGTGCATTGAACCCAGTAGTCGTGAACCCTCTTTAAAATAG 2310 0.4087 MNLLTQHVTHPHFIISSAYKSNPSFHHHVQLHLGLSVLTPFSQLPIMPVSTGNGRIFRRRKWSTFVSNSATSPAPLPPDPDKEQKQKGEGSDGVVAEGESPDLQTLFRRFWKVAAPYWSSDDKTQARLQLAGVFALTLATTGISVGFSFLGRDFYNSLANKDQEQFSKQLLYYLGAFAGGIPFFVLRDYARETLSLRWRSWMTRYYMDRYLKNQTFYKLQSQSIIDNPDQRIVDDLSSFTGTAISFSLTLFNAAVDLISFSNILYGIYPPLFVVLLIYSIGGTAISVYLGKGLVTLNFLQEKKEADFRYGLVRVRENAESIAFYGGEQSEMQLLLQRFKSAFENLSKLLISSRNLDFFTSGYRYGIQVLPAAVVAPMYFSGKIEFGVINQSVSAFNHILSDFSLIVYQFQAISAFSAVINRLGEFDDILDRSNSKSLSDTLEDIEITYKDIRSSTTLESNGSTPPEKYETLLEIENLILKTPSESTLIRDLSLSIKEKDNLLVMGPSGSGKTSLLRAMAGLWKTGTGKVTYSVKGGVDPEQSICSDVDTPVIKQSICSDVDTPVIKTSNDTYDDRGKSISRKSSIFFLPQKPYMVLGTLRQQLLYPTWADGLVSVSDSASEKNVLPFLTNNPNSDNMSDVHMKPTSDELIKVLEDVRLGYLLARFSLDSTHEWSSVLSLGEQQRLAFARLLLSKPQLILLDESTSALDEDNEVHLYQKIAAAGITYISVGHRSTLYDYHSKVLRISTLDSKDERPNWCIEPSSREPSLK* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4010 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 738 IPR027417 -
Lja3g4010 769 MobiDBLite consensus disorder prediction 68 99 - -
Lja3g4010 769 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 472 769 IPR003439 GO:0005524
Lja3g4010 769 ProSitePatterns ABC transporters family signature. 677 691 IPR017871 GO:0005524
Lja3g4010 769 CDD ABCD_peroxisomal_ALDP 472 746 - -
Lja3g4010 769 SUPERFAMILY ABC transporter transmembrane region 108 425 IPR036640 GO:0005524|GO:0016021
Lja3g4010 769 Pfam ABC transporter 489 705 IPR003439 GO:0005524
Lja3g4010 769 Gene3D - 441 751 IPR027417 -
Lja3g4010 769 Pfam ABC transporter transmembrane region 2 122 379 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja3g4010 769 PANTHER ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 85 761 - -
Lja3g4010 769 Gene3D ABC transporter type 1, transmembrane domain 95 428 IPR036640 GO:0005524|GO:0016021
Lja3g4010 769 SMART AAA_5 497 756 IPR003593 -
Lja3g4010 769 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 131 414 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja3g4010 769 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 85 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4010 Lja-Chr3 78994491 79006098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4010 50 768 Acyl Lipid Metabolism Gene Families AT1G54350 63.435 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4010 - - lja:Lj3g3v0937780.2 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4010 3 78994491 79006098 Lja3g4010 3 78994491 79006098 ECH