Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3998 ATGGATGCTCAATTTAAAAAAGCCTCGGATGAGATGAATAGGAAGAAGATTCATGGTGATTCTTCAACGGCTGAGTTCAACAATTCCAATATGACTCCTTCTAAGGGTGCAAGTTCTCCATCTGATGCAAGATCATGTGTATCTTCTATTGGAGACGCGTCCGGTAGTATTAAAGAAGGGGATGTGGATCAAGAATATTTGCCAACAGATCAGAATGTTGCTTATGCTGCTGGGGGCTATTATGGATACTACTATCCAGGTTATGGTGGTTATTATGGAGAGTCTGACAACCAAGGATATTATGTTGGTGCTGAAGCTGTGGATTTTCAGTATCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCATGCCAGGATTTCAGCCTGGCTATTCTTCATACTTCCCTCTGAGTCCATCTGGTGTTGATGGACAATATGTTGGTCATCAAGTCTACCCCCCTGGTTCCATCTTTCAACAACCCATTGCATCACCTGGTTATTTTTCAGCTTCTCTACCTTATGGGGAGTTAATGCCATCAGCATACTCATGGGATTCATCAGTAACCGCACCTTTTAATGAATTTTCTGGTAAACCAAGTGGTAGAACTAATTTGTCTTCCCAAAGTCGCACAGGCGGTGTATTGAATAAGTCCGCAACCGCGCCTAACTCGAGCAACCCGTCTGAAGTGAACGGTTCCACACCATTAGTTGTGGTTTCATCAACTCATGTTAAGAATAACCAGCAAAAACAAGCAAACAAGGCACCCGTTTGTGGCTCAGTTCTCCATTCAGATTCTATGGCGAAGGGTTGCTTGCCTATCGCCAAGTTTCCCACATACAATCAAGGAAAGAGTGGATACCACTATCCAAACAACGTGCTTAACGCGAAAGCAAACACAAAGGGTTGGGTTAGTACTGAAAAGTTGAAATTGAGAGGCAAGGTTAACAATTCACTTTATGAGCAGAATCAGGGTCCTAGGACAGCTAATGCTAAAAGTGAATTAGTGTCTGGAGGTGATTCTTTGAGAACCTTGGCCGTAGTTGGAAGTGGGAATGGCAACAGCAAAATCAGGACAGATCAATATAACCTTCCTGATTTTCCAACCAAATACGATCATGCGCTTTTCTTTGTCATCAAATCATACAGCGAAGATGATATCCATAAGAGCATCAAGTACGATGTGTGGGCCAGTACACCTAATGGGAACAAGAGGCTGGATAGTGCATTTCAAGATGCACAAAAGCGAACGGAAGAGAAAGGAAGCAAGTGCCCCATATTCCTTTTCTTTTCGGTCAACGCTAGCGGTCAATTTTGTGGAGTAGCTGAGATGATTGGGCGAGTTGATTTCAATAGAAGTATGGATTTCTGGCAACAAGATAAATGGAATGGATATTTCCCTGTCAAATGGCACATTATAAAGGATGTTCCAAATCCACAGCTACGGCGTATAATCCTTGAGAATAATGATCACAAGCCTGTAACTAATAGTAGAGACACACAAGAGGTGAGTTTTCCCCAAGGTGTTGAAATGCTCAATATTTTCAAGAACTATGCAGCAAGAACTTCCATATTGGACGACTTTGAATTTTATGAAAGCCGTCAGAAGGTTATGCAGGAGAAGAAAATAAGGCAATCTATACCCCATACAAATGCACAGCATATAGATGACATAACCAATGCACTTGGGTCAGTAGACCTTTCAGCTGTAAAGAACATGGAGGAGGAACCCAAGTTGGTTGAGAAAGTGAATGACTGA 1761 0.4208 MDAQFKKASDEMNRKKIHGDSSTAEFNNSNMTPSKGASSPSDARSCVSSIGDASGSIKEGDVDQEYLPTDQNVAYAAGGYYGYYYPGYGGYYGESDNQGYYVGAEAVDFQYPVMQADNGSYVYLMPGFQPGYSSYFPLSPSGVDGQYVGHQVYPPGSIFQQPIASPGYFSASLPYGELMPSAYSWDSSVTAPFNEFSGKPSGRTNLSSQSRTGGVLNKSATAPNSSNPSEVNGSTPLVVVSSTHVKNNQQKQANKAPVCGSVLHSDSMAKGCLPIAKFPTYNQGKSGYHYPNNVLNAKANTKGWVSTEKLKLRGKVNNSLYEQNQGPRTANAKSELVSGGDSLRTLAVVGSGNGNSKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYDVWASTPNGNKRLDSAFQDAQKRTEEKGSKCPIFLFFSVNASGQFCGVAEMIGRVDFNRSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRRIILENNDHKPVTNSRDTQEVSFPQGVEMLNIFKNYAARTSILDDFEFYESRQKVMQEKKIRQSIPHTNAQHIDDITNALGSVDLSAVKNMEEEPKLVEKVND* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3998 586 MobiDBLite consensus disorder prediction 196 235 - -
Lja3g3998 586 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 17 551 IPR045168 -
Lja3g3998 586 PANTHER OS01G0679900 PROTEIN 17 551 - -
Lja3g3998 586 ProSiteProfiles YTH domain profile. 375 516 IPR007275 GO:0003723
Lja3g3998 586 MobiDBLite consensus disorder prediction 1 21 - -
Lja3g3998 586 Pfam YT521-B-like domain 377 517 IPR007275 GO:0003723
Lja3g3998 586 MobiDBLite consensus disorder prediction 1 64 - -
Lja3g3998 586 Gene3D ph1033 like domains 353 531 - -
Lja3g3998 586 MobiDBLite consensus disorder prediction 22 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3998 Lja-Chr3 78865125 78870528 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3998 K20102 - gmx:100812429 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3998 3 78865125 78870528 Lja3g3998 3 78865125 78870528 ECH