Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3997 ATGCCGCTATTTATCTCCGACGAGGAGTTTTCGCGGTGCTCCGGCGACACCACCGCCGTCGCCGCCAAGGCGGACTCCTACATCCGCAGCCTCCTCCTCGAACTCGACACCGTCCGCGCCAAAGCTGACGCCTCCGACATCAACGCCGAGCAGAACTGCTCTCTCATCGAGCAGAAGTATCTCTCTCTCGCCGCCGAATTCTCCAAGCTCGAGTCGCATGTTTCCGACCTCCAATCGTCTCTCGATCAGCGCCAACGAGAACTCTCCGATGTGCAGTCGCAGAATCACCAATTTCAGCTGCAACTGGTTGAGAAGGATAGGGAGATTGAGAGGTTGAAGACGGAGGTGAACGAGCTGCATAAGGCGAAGAGACAGTTGATTGAATTGAACGAGCAGAAGGATTCGGAGCATAGCGAGAAGAGCGCTACCATCAAGAGCTATCTTGATAAATTTATTCGTTTGTCGGAAAATGCTGCGCTTAAGGAAGCACGATTAACTGAAGCTGAGGCCGAATTGGTGCGGTCGCGTGCTGCTTGTGCTCGCCTTGAACAGGAGAAGGAGATTGTTGAGAGGCAGAATGCTTGGCTTAACGAGGAGTTAACGGCTAAAGTTAACAGTTTCAATGAGCTGCGCAAGAGACATACTGAATTGGATACTGATTTGACTTCCAAGCTTGCAGATGTAGAGAGACAATTCAGTGAATGCTCTAAATCTTTAGAGTGGAATAAGGGTAGAGTGAAGGAGCTGGAAATAAAGCTTAAATCTATGCAAGAGGAATTAATTACAGCTAAAGATGCAGCTGCAGCCAATGAAGAGCGATTCTCTGCTGAGATCTCCACTGTCAATAAGCTTAATGAGCTCTATAAAGAGAGTTCGGAGGAGTGGTCTAGAAAAGCAGCGGACCTTGAGGGTGGGGTAAAAGCTATGGAGTCATACCTAAAGCAAGTTGAAGATGATTATAAAGAGAAACTTGAGAAGGAATCATCTGCTAGAAAGCAGGTTGAAAAGGAGGCTGCTGATTTGAAAGAAAAGCTTGAGAAGTTTGAAGCAGAAATTGAGGCAAGCAAGAAGAGTAATGAACTAATTAATCTTCCACTCAGCAGTTTCTCTACTGAACCGTTGCTGACATCTATTGTAGCTGATGGCATGGTTGAGGAAAATAACATGCTAGTGCCAAAAATTCCTTTTGGTGTTTCCGGAACAGCATTAGCCGCTTCACTTCTGCGAGATGGATGGAGTTTGGCAAAAATGTATGCAAAATACCAAGAGGCTGTTGATGCATTTAGACATGAACAATTGGGAAGGAAGGAGTCAGAGGCAATATTGCAACGGGTTCTATACGAGTTAGAGGAGAAAGCAGAAGCTATAATAGATGAAAGAGTGGAACATGAAAAGATGGTTGACACATACTCCTTGATGAGCCAAAAATTGCAAAACTCCCTCAATGATAATTCAAACTTGGAGAAAACCATTCAAGAACTGAAGGCTGACCTCAAACGGCATGAACGAGAATACAATCTTGCACAGAAAGAAAATGACGACCTTCGTAAACAGGTCACAGTACTTTTGAAGGAATGCCGAGACATACAACTTCGTTCTGGGTCAAATGGTAATGATGTTGTTGATGTTGCATCAAATATTGCTTTAAGGACAAGTAGAGGGACCGAACCTGAAGATGTCATATCAGACCACATTTTAACCTTCAAGGACATAAATGGATTAGTTGAGCAGAATGTCCAACTCAGAAGCCTTGTACGCAGTCTTTCTGGCCAAATTGAAAATCAGGAGGTGGAATACAAGGAGAAGCTTGAAATGGAGCTAAAAAAACATACTGAAGAAGCTGGTTCTAAAGTCGCAGCTGTTCTTCAGAGAGCAGAAGAACAAGGGAACATGATTGAATCACTTCATGCATCTGTTGCGATGTATAAGAGGTTGTATGAGGAGGAGCATAGTCTTCATCTGTCTCATGCACATTCTTCAGAAGCTCTTGCAGCTGTTTCAGAAGTTAGAAGAAACAATCTTAAGACTTCAATTGAAAGTTCACAGGAAATTGCAAAGAAATCCCTGGAAAAAGCTGCTGAGCGTGTAAGATCCCTTGAGGATGATTTAGCAAAGTCTAGGAGTGAGATTATTGTCTTACGAACAGAACGTGACAAGATATTGCTTGAAGCAAATTTCGCTAGAGAGAGGCTTGATAGCTCCATGAAGGAAATTGAACACCAGAAAGCTGAAGCAAAAGGAATCCTAGCAAGAAATGTAGAGTTTTCCCAGCTAATTGTTGACTACCAACGCAAGTTGCGTGAAAGCTCTGATTCCCTTAATGCTGCTGAGGAGTTGACTCGGAAACTTTCTATGGAGTTGTCAATTTTAAAGCATGAAAAGGAAGTCATATCAAATGCTGAAAAGAGAGCTTCTGATGAGGTTCGCAGTTTATCTGAAAGGGTGCAGAGCTTGCAGGCTAGTTTGAGTACCATACAGAGTGCCGAGGAAGTTCGAGAGGAAGCAAGAGCTGCTGAGAAGGTAAAACAAGAAGAATATATAAAGAAATTGGAGAGGGAATGGGCTGAGGCCAAGAAAGAGTTACAGGACGAGCGTGAAAATGTGCAGAGACTCACACTAGACCGGGAGCAGGCCATGAAAAATTATATGAGACAGGTTGAGGATACACATAAAGAGTTAGCTAATGCATTGAGCGCAGTTGCATCTGCTGAATCTAGAGCTTCTGTTGCAGAGGTAAAGCTTTCCAGCCTTCAAAGAAAAATGGGTCCCTCAAATGAAAAGCTTGTCGAAGTCGATGGTGTGAGTGGACCTTCCACTTTATCCAGTGATGAGGTTGTTGCTGAGTTGCAAACCGCAAAGGAGGAGATTGAAAAACTTAAAGAGGAGGCGCAAGCTAACAAAGCTCATATGCTGCAGTATAAGAGCATTGCTGAGGTGAATGAAGATGCAATGAAACAGATAGAAATTGCTCATGATAATTACAAGATAGAGGTTGACAATGCAAAAAAGGCACTAGAACTTGAAGTTCATGCACTTAGAGAGAAGGTTTCAGAGCTCGAAAATGAATCAAGTTTGAAATTTGAAGAAGTGGCATCTGCAACTGCAGGAAAAGAAGAGGCTCTTACATCTGCGCTGGCTGAAATCTCAAATCTCAAAGAAGAAATCTTAAACAGATGTTCTCAAATTTCAGCAATGGAACTTCAGATCTCTGATTTAAAAGAACAGCTGGACAAGGAGCACCAGAAATGGCGTGCTGCTCAAACCAATTACGAAAGACAGGTTATTCTCCAATCTGAAACAATTCAGGAGTTGACAAAAACATCGGAAGCGCTAGCTTTGCTGCAGGAGGAGGCATCTAAACTACGTACATTAGCTGATGCTCAGAAAATTGAAAATAGGGAATTAAAGGCCAAGTGGGAAGAGGAGAAGGCAGGTCTTGAGAGGTCCAAGAATGATGCTGAGAAGAAATATGATGAAATCAATGAACAGAATAAAATACTACATAGCCAACTTGAGGCTTTGCATATTCAATGGGCTGAGAAGGAGCGTAATGCAGCTGGAATTTCATCTGGAAGTAGCAGTGCAGATACATTTAGTGATGCTGGCCTTCAAAATGTTATTAGTTATCTCCGACGTTCAAAAGAAATTGCAGTAACAGAAGTTTCGTTGTTAAAGCAGGAAAAATTGCGATTACAATCTCAACTTGAGAGTGCTTTGAAGGCATCAGAGTCTGCGCATGCATCTCTAGAAGCTGAGCGTGCAAAATCAAGATCATTTTTGTTTTCTGAAGAAGAGTTCAAATCATTGCAGCTTCAGCTCAGGGAAATAAACTTGCTTCGCGAGAGTAATGTGCAGCTCAGGGAAGAAAATAAGTACAATTTTGAGGAGTGTCAGAAATTGCGTGAAGTAGCACAGAAAGCAAGAGTTGAGACAGAGAATCTAGAGAATCTTCTAAGGGAAAGAGAAATTTTGCTGGAAAGTCACAATAAAGAAATTGAAACACTAAAATTGGAAAAAGATAATCTCAATTACAAGGTTACTGAGTTGCTTGAAAGGTGTAAAAATGTTGACGTGGAGGATTATGATCGAGTGAAGAAACTTGTTAGAGATTTGCAGGATAAATTGAGAGATAGGGATGCTCAGATTGAGGAAACTGCTAAAGTTCTTTCAGAAAAGCAGGATTCTGTTTCACGTCTAGAGCAAGACCTTTCCAATTGCAGATCAGAGCTTATGGAGAGGGAGAAAAGAATTAACGACATTCTGCATACTGAGGCTAACCTAAAACAGGATACGGAGAAGCATAGGAAATTGCTGGCTCAGTTTAAGAAGAAGATAGATGCTTTGTCAAGGGAAAAGGAAGACCTAGTTAAAGAAAATCAGCAACTTTCTAAACAATTGGATGAAATTAAAGGTAAAAGGTTGACAAGTGATACAACTGCTGAACAAGCAATGAAGGAGGAAATGGACACCAGAATACAGACTCTGGAAAAAACAGTGGCAAGACTAAGAGATGAAGTAAAGAAGGAGAGGGAAGACAAGAATATGGAGAGAAACAGGAGATTGAAGACTGAAAAGGCCATAAAAGACTCTTACAACAATGTTGAGCAGGAGAAAAAACAGTTTATTAATGAACTTGAGAGGCATAAGGAAGCTCTGAAGCGGTTATCAGATGAAGTGGAAAAACTTAAGATTGTTGTTGGCAATCTTCCCGAGGGATCCGATGTAGCCCAACTTCTTTCTGGACCCAATGTCGATGACTTCTCTGCTATTTATATGTCCGCTGTTGAAAATTTTGAAAAGGTAGCTCAATCAGTAATTAGCGAGTTTGGAGGCCGTGGCAATCTTGGAGATGCAACAGCAACTACAGATGGTTCAGCAGCTGCTACAGGTTCTGTGGTCCATGCTCAATCTCAAAGCATTATACCCTTGGCGGCCTCTGGAACAAGCAACTTACCACCTAAAGCCACTGGGGAAAGTGAGAAAAGACTTGCATTGCCTAAATCTGTTGTTGAAACTCGTAAGGCAGGTAGGAGGTTGGTCAGGCCACGACTTGTAAAACAGGATGAGCCACAAGGTGATGTAGAAATGTCTGAAACTGAAGGGCTAGGGGGCAAACCTGGGCCTTCTAGTGACACAGAAACACAAAGCAATTTGGCTCTATCATCTCAACCATTGGCTCGTAAACGTGTTGCTCCTACCTCCACTTCTGAACTACTTGAAGAATCTGTAGCTCCTGGTGACAAGAGCTCTGAACCTTTGGTAAAGAAGTCTAGAGGAGTAGAGTCCCAAGAAGAGACTGGCGAAGAACCACCTGCTGCAACTTCAGAATTTAGTGGCAGTCACCCAGCAACTGAAGAATCATTTGAAAGTGGGGAGCTGCCTCAAGGCCAAAATGAGGAACTCGGTGATGCTCAAAATGATGACGGTGAGACTGCTGTTAGTAAAGATGAGGAGTCGAAAGATCCGCAACAGTTCGATGGTACTACGAGTCAAGAGGAATTACAAGGTGACAAGACTGGAATTTCAGAAGAGAATCCAGATCAATCCGCTGAAGCAAAAATACTCTCTGATGAGATGCAGATGGATCACCCTGAGCCAGACAACCAGCAGCCGGGTAGTGACAGAGAGGAGGGAGAAATGTTGCCAGAGACCGGAGATTCTGAAGGTGAACCCCAAGAATCTCGGGAAGGTCCATCTGACCCTGTTGCATCCCCTGAACCTTCCCCGGCTAGGGTTGATGATGAAGGTTTAGAGGCTGGTGAGATCAATTCTCCTGATCTGTCGAGTGAGGATAAGAATGATGAGGGTGACTTGGTTGAGGAGGCAGCTGATGGTTCGGATAAGTTAATTGATGTTAACGAAACTACATCAGTTGAGAGTGATCCGGTGGCTGAGCCTGCGCCTGTTGCGAGTGAGAGTACTTTGACGAGTGGTGCTGCTGAAAGTAGCTCCTCCAAATCAAACTTACCTGTTCCAAAGCAAGGGACCACCGGTACACCCTCTGAAACTGGAGAGTCAAGGCAGGCATCACCAATTAATCCATCAACGACAATAAACTTACAAGAGCGAGCCCGGCAGAGGGCTCAATTGAGACAGGCAGGACAGGAAAGGGCGACTTCTGCCACTCCTAGAGGTCGTGGAAGACCTAATATCCGTGGCGGTCGAATTGTTCGAGGTCGTGGTGGACGGCGTCCGCCGCCTCATGCTGATGCTTGA 6216 0.4363 MPLFISDEEFSRCSGDTTAVAAKADSYIRSLLLELDTVRAKADASDINAEQNCSLIEQKYLSLAAEFSKLESHVSDLQSSLDQRQRELSDVQSQNHQFQLQLVEKDREIERLKTEVNELHKAKRQLIELNEQKDSEHSEKSATIKSYLDKFIRLSENAALKEARLTEAEAELVRSRAACARLEQEKEIVERQNAWLNEELTAKVNSFNELRKRHTELDTDLTSKLADVERQFSECSKSLEWNKGRVKELEIKLKSMQEELITAKDAAAANEERFSAEISTVNKLNELYKESSEEWSRKAADLEGGVKAMESYLKQVEDDYKEKLEKESSARKQVEKEAADLKEKLEKFEAEIEASKKSNELINLPLSSFSTEPLLTSIVADGMVEENNMLVPKIPFGVSGTALAASLLRDGWSLAKMYAKYQEAVDAFRHEQLGRKESEAILQRVLYELEEKAEAIIDERVEHEKMVDTYSLMSQKLQNSLNDNSNLEKTIQELKADLKRHEREYNLAQKENDDLRKQVTVLLKECRDIQLRSGSNGNDVVDVASNIALRTSRGTEPEDVISDHILTFKDINGLVEQNVQLRSLVRSLSGQIENQEVEYKEKLEMELKKHTEEAGSKVAAVLQRAEEQGNMIESLHASVAMYKRLYEEEHSLHLSHAHSSEALAAVSEVRRNNLKTSIESSQEIAKKSLEKAAERVRSLEDDLAKSRSEIIVLRTERDKILLEANFARERLDSSMKEIEHQKAEAKGILARNVEFSQLIVDYQRKLRESSDSLNAAEELTRKLSMELSILKHEKEVISNAEKRASDEVRSLSERVQSLQASLSTIQSAEEVREEARAAEKVKQEEYIKKLEREWAEAKKELQDERENVQRLTLDREQAMKNYMRQVEDTHKELANALSAVASAESRASVAEVKLSSLQRKMGPSNEKLVEVDGVSGPSTLSSDEVVAELQTAKEEIEKLKEEAQANKAHMLQYKSIAEVNEDAMKQIEIAHDNYKIEVDNAKKALELEVHALREKVSELENESSLKFEEVASATAGKEEALTSALAEISNLKEEILNRCSQISAMELQISDLKEQLDKEHQKWRAAQTNYERQVILQSETIQELTKTSEALALLQEEASKLRTLADAQKIENRELKAKWEEEKAGLERSKNDAEKKYDEINEQNKILHSQLEALHIQWAEKERNAAGISSGSSSADTFSDAGLQNVISYLRRSKEIAVTEVSLLKQEKLRLQSQLESALKASESAHASLEAERAKSRSFLFSEEEFKSLQLQLREINLLRESNVQLREENKYNFEECQKLREVAQKARVETENLENLLREREILLESHNKEIETLKLEKDNLNYKVTELLERCKNVDVEDYDRVKKLVRDLQDKLRDRDAQIEETAKVLSEKQDSVSRLEQDLSNCRSELMEREKRINDILHTEANLKQDTEKHRKLLAQFKKKIDALSREKEDLVKENQQLSKQLDEIKGKRLTSDTTAEQAMKEEMDTRIQTLEKTVARLRDEVKKEREDKNMERNRRLKTEKAIKDSYNNVEQEKKQFINELERHKEALKRLSDEVEKLKIVVGNLPEGSDVAQLLSGPNVDDFSAIYMSAVENFEKVAQSVISEFGGRGNLGDATATTDGSAAATGSVVHAQSQSIIPLAASGTSNLPPKATGESEKRLALPKSVVETRKAGRRLVRPRLVKQDEPQGDVEMSETEGLGGKPGPSSDTETQSNLALSSQPLARKRVAPTSTSELLEESVAPGDKSSEPLVKKSRGVESQEETGEEPPAATSEFSGSHPATEESFESGELPQGQNEELGDAQNDDGETAVSKDEESKDPQQFDGTTSQEELQGDKTGISEENPDQSAEAKILSDEMQMDHPEPDNQQPGSDREEGEMLPETGDSEGEPQESREGPSDPVASPEPSPARVDDEGLEAGEINSPDLSSEDKNDEGDLVEEAADGSDKLIDVNETTSVESDPVAEPAPVASESTLTSGAAESSSSKSNLPVPKQGTTGTPSETGESRQASPINPSTTINLQERARQRAQLRQAGQERATSATPRGRGRPNIRGGRIVRGRGGRRPPPHADA* 2072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3997 2071 Coils Coil 801 821 - -
Lja3g3997 2071 Coils Coil 477 525 - -
Lja3g3997 2071 Coils Coil 74 139 - -
Lja3g3997 2071 Coils Coil 759 793 - -
Lja3g3997 2071 PANTHER NUCLEOPROTEIN TPR 1 2050 - -
Lja3g3997 2071 Coils Coil 1531 1565 - -
Lja3g3997 2071 Coils Coil 1431 1472 - -
Lja3g3997 2071 Coils Coil 1382 1416 - -
Lja3g3997 2071 Coils Coil 682 716 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1751 1765 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1824 1846 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1777 1802 - -
Lja3g3997 2071 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2050 - -
Lja3g3997 2071 Coils Coil 1269 1289 - -
Lja3g3997 2071 Coils Coil 724 744 - -
Lja3g3997 2071 Coils Coil 825 920 - -
Lja3g3997 2071 Coils Coil 1111 1177 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1970 2039 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1856 1895 - -
Lja3g3997 2071 Coils Coil 239 273 - -
Lja3g3997 2071 Coils Coil 1221 1252 - -
Lja3g3997 2071 Coils Coil 151 199 - -
Lja3g3997 2071 Coils Coil 1297 1352 - -
Lja3g3997 2071 Coils Coil 446 466 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1708 1740 - -
Lja3g3997 2071 Coils Coil 984 1022 - -
Lja3g3997 2071 Coils Coil 942 969 - -
Lja3g3997 2071 Coils Coil 306 358 - -
Lja3g3997 2071 Pfam TPR/MLP1/MLP2-like protein 1047 1174 IPR012929 GO:0006606
Lja3g3997 2071 Coils Coil 1485 1519 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1809 1823 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1644 2071 - -
Lja3g3997 2071 Coils Coil 1062 1093 - -
Lja3g3997 2071 MobiDBLite consensus disorder prediction 1660 1693 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3997 K09291 - gmx:100811882 2882.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3997 3 78826394 78864541 Lja3g3997 3 78826394 78864541 ECH