Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3994 ATGTCTCTGTTTCAGTCCCTGTTGTTGAACCAGAGCGACCCTTTTGATCACTTCCGAGCACTTCTCAGTGAAAATCCACACTCATCGTTGCATGAAGGGAACACCCAAATGGATTGGAAGGAGACCAGCGATGCCCACATCTTCCAAATCGATCTTCCGGGGCTTACCAAAGAGGATGTGAAGCTTGAAGTACGTGAAAGCAGAGTACTCTGCATCAGAGCAGAGAAGAAAGAAGAGCAAGAAGAAGAAGAAAAAGAAGAGAAGAAGAGGCTCACATGGCATTGCAGGGAGAGAGGAGGGAATGGTGTGTTCTTGAGGGAGTTCAGATTGCCTGAGAATGCAAAGGTTGGTGATGTCAAGGCCGAAATGCGTGATGGGGTGTTGACCATAACAGTGCCTAAGGATCATGAGACCAAGAAGAAGCACAAGCATCACAAGAAGGAGGTTCAAATTTCTGGGGAGGATGGTGAAGGCGTTTCCCCAAAAGGAATTGGGCGTTTCGTTTGCTGCAAAGCTTAG 519 0.4759 MSLFQSLLLNQSDPFDHFRALLSENPHSSLHEGNTQMDWKETSDAHIFQIDLPGLTKEDVKLEVRESRVLCIRAEKKEEQEEEEKEEKKRLTWHCRERGGNGVFLREFRLPENAKVGDVKAEMRDGVLTITVPKDHETKKKHKHHKKEVQISGEDGEGVSPKGIGRFVCCKA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3994 172 Coils Coil 69 94 - -
Lja3g3994 172 MobiDBLite consensus disorder prediction 136 158 - -
Lja3g3994 172 PANTHER 17.8 KDA HEAT SHOCK PROTEIN 23 151 - -
Lja3g3994 172 SUPERFAMILY HSP20-like chaperones 6 143 IPR008978 -
Lja3g3994 172 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 23 151 - -
Lja3g3994 172 Pfam Hsp20/alpha crystallin family 38 152 IPR002068 -
Lja3g3994 172 Gene3D - 1 153 IPR008978 -
Lja3g3994 172 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 28 152 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3994 Lja-Chr3 78779389 78779907 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3994 K13993 - gmx:100813153 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3994 3 78779389 78779907 Lja3g3994 3 78779389 78779907 ECH