Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3978 ATGAACTTTCAAGCTTCTTCTTTCACTTCCTTAAAGCTGTTCTGTTTTCTTTCTATACTCTTCTCAACTCTGGCCTCAGGTGATGAAATTACATGTGAAACAGTAGGAGCCACACAGAGTAATAATAACAGTGAAGCTTTCCATTACAAAATTGGGTCAATTGCTTCTGTGCTAGTTGCTGGTGCTCTTGGTGTGATTCTCCCATTGTTGGGAAACAAAATCCCACCTCTGAATCCCAAAAATGACATCTTTTTCATGGTGAAAGCGTTTGCAGCAGGGGTGATTTTAGCAACTGGGTTCATCCACATACTACCAGATGCATTTGAAAGCTTGACATCACCATGCCTTAAGGACAATCCATGGGGGAAGTTTCCTTTCGCTGGTTTTGTTGCCATGTTATCCTCTATTGGAACCTTGATGGTGGATTCTTTTGCAACTGGGTATTACCAAAGGCAACATTTTAATCTTTCAAAGCCAGTTCCTGCAGATGAAGAATTGGGAGATAAACATGCTGGTCACATGCATGTTCATACACATGCCACACATGGTCATGCTCATGGATCCACTAACCCTTCTGGGGATGCTGTAACATCTGAATTAATTCGGCAACGCATCATATCTCGAGTGCTTGAGCTAGGAATAGTGGTCCATTCAGTGATTATTGGCGTATCTTTGGGTACTGCACAAAGCATTGATACCATAAAGCCTCTTCTAGTGGCCTTGTCTTTCCATCAATTTTTTGAGGGGATGGGACTTGGAGGCTGCATATCTCAGGCAAAGTTCGAATCAAGGGCTACTGCAATTATGGCAACTTTTTTCTCCTTAACAACACCAATTGGTATAGCAATTGGAATGGGAGTTTCAAGTGTGTACAAAGAGAATAGCCCAACTGCTTTAATTGTTGAAGGGGTTTTCAACTCTTCTTCAGCTGGAATTTTGATTTACATGGCATTAGTGGACCTTCTAGCAGCAGATTTTATGAATCCCAAGTTGCAGAACAATTTGAAGCTTCATGTAGGAGCAAATATCTCTCTTCTTCTAGGTGCAGCTTCTATGTCTGTATTGGCCAAATGGGCCTAA 1080 0.4157 MNFQASSFTSLKLFCFLSILFSTLASGDEITCETVGATQSNNNSEAFHYKIGSIASVLVAGALGVILPLLGNKIPPLNPKNDIFFMVKAFAAGVILATGFIHILPDAFESLTSPCLKDNPWGKFPFAGFVAMLSSIGTLMVDSFATGYYQRQHFNLSKPVPADEELGDKHAGHMHVHTHATHGHAHGSTNPSGDAVTSELIRQRIISRVLELGIVVHSVIIGVSLGTAQSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFESRATAIMATFFSLTTPIGIAIGMGVSSVYKENSPTALIVEGVFNSSSAGILIYMALVDLLAADFMNPKLQNNLKLHVGANISLLLGAASMSVLAKWA* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3978 359 PANTHER ZINC/IRON TRANSPORTER 16 359 - -
Lja3g3978 359 PANTHER METAL TRANSPORT PROTEIN 16 359 - -
Lja3g3978 359 TIGRFAM zip: ZIP zinc/iron transport family 32 359 IPR004698 GO:0005385|GO:0016021|GO:0071577
Lja3g3978 359 Pfam ZIP Zinc transporter 48 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3978 Lja-Chr3 78446446 78448845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3978 6 359 Inorganic Solute Cotransporters AT3G12750 60.942 5.45e-153 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3978 K14709 - gmx:100805124 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3978 3 78446446 78448845 Lja3g3978 3 78446446 78448845 ECH