Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3974 ATGGCGGAGAGTGGTGGCGGAGGAGGACACGGCAGAATGGAACCACTTCTTGTTACACCGGAGGAACAAGGTGGTGGAGGAAACCCTTCATGGAGACTCAACGTGAAGGAGTTTCATCTACCAAACCAAACTGTTGATCATCAAAATAAGTGTTTAAATGGCCTAATTCGAAAACCCAGGAAGCAACGCAAAGTGGCAGAATATTACAAGAAGCAAGAGAGACTCCTTGAAGGATTTAATGAGATGGACACTATGACTGAAAAGGGCATTTTCCCTGGTGGTCTCACTCAGGATGAAATGAAGCAACTAGCTAAGAATGAACGTTTCGCGGTCACTGCGTCAAACGTGTGTAACTTGATTCTCTTTGGGGCAAAGGTTTTCGCCTCATACGAGAGCAGATCATTAGCAGTCCTTGCCTCAACCTTGGATTCTCTCTTGGATCTCTTGTCAGGGTTCATATTGTGGTTCACTTCATATTCGATGAAAAAACCGAACCACTATCACTACCCAATCGGAAAGAAACGTATGCAACCAGTGGGTATCATTGTTTTCGCATCAGTTATGGCAACCTTGGGGTTGAATATTTTGATTGAATCTTGCAGGCAACTTGTTGCGAAGTCTAAACCTGATGGGGATCCAACAAAGGAGAAATGGATGATTGGGATCATGGTATCTGTGACTGTAGTCAAGTTCATTCTTATGCTCTATTGTCGAAGATTTAAAAATGAAATTGTGAGAGCATATGCACAAGATCATTTTTTTGATGTCATTACTAATTCCGTTGGATTAGCCGCTGCTGTTCTAGCTATCAAGTTCAAATGGTGGATTGATCCAATAGGAGCCATTATTATAGCATTGTATACAATTAACACATGGGCGAAGACCGTGATTGAGAATGTTTGGTCGCTAATTGGAAGGACAGCGCCGCCTGATTTTCTTGCTAAGTTAACCTACCTTATATGGAATCACCATGAACAGATTAAGCACATTGACACGGTTAGAGCATACACCTTTGGGGCAGAATACTTTGTGGAAATTGACATTGTTTTGCCACAAGACATGCCTCTCCACCTTGCTCACAACATTGGTGAGACACTCCAAGAGAAGGTGGAACAACTTCCAGAAGTTGAGAGAGCTTTCGTGCACATAGATTTCGAGTTCACTCATAGACCTGAGCATAAGATCATGGTATGA 1194 0.4263 MAESGGGGGHGRMEPLLVTPEEQGGGGNPSWRLNVKEFHLPNQTVDHQNKCLNGLIRKPRKQRKVAEYYKKQERLLEGFNEMDTMTEKGIFPGGLTQDEMKQLAKNERFAVTASNVCNLILFGAKVFASYESRSLAVLASTLDSLLDLLSGFILWFTSYSMKKPNHYHYPIGKKRMQPVGIIVFASVMATLGLNILIESCRQLVAKSKPDGDPTKEKWMIGIMVSVTVVKFILMLYCRRFKNEIVRAYAQDHFFDVITNSVGLAAAVLAIKFKWWIDPIGAIIIALYTINTWAKTVIENVWSLIGRTAPPDFLAKLTYLIWNHHEQIKHIDTVRAYTFGAEYFVEIDIVLPQDMPLHLAHNIGETLQEKVEQLPEVERAFVHIDFEFTHRPEHKIMV* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3974 397 Pfam Cation efflux family 113 303 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lja3g3974 397 PANTHER METAL TOLERANCE PROTEIN 9 28 397 - -
Lja3g3974 397 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 308 384 IPR036837 -
Lja3g3974 397 Gene3D Cation efflux protein transmembrane domain 109 303 IPR027469 -
Lja3g3974 397 SUPERFAMILY Cation efflux protein transmembrane domain-like 106 305 IPR027469 -
Lja3g3974 397 TIGRFAM CDF: cation diffusion facilitator family transporter 111 384 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lja3g3974 397 Pfam Dimerisation domain of Zinc Transporter 310 384 IPR027470 -
Lja3g3974 397 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 28 397 - -
Lja3g3974 397 Gene3D Cation efflux protein, cytoplasmic domain 308 385 IPR036837 -
Lja3g3974 397 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3974 Lja-Chr3 78358072 78361667 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3974 - - gmx:100797536 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3974 3 78358072 78361667 Lja3g3974 3 78358072 78361667 ECH