Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3956 ATGGAAGGCGGCACTAAGGGAAACACTGTTGTCACTTATTCTCATATGGCTCCATCTAAACCCCTTTTGGTGCCCGGTTCACCTTGTCTATTTGGTGATCAGAATGAAAAATACATGGTAAAGAATGATACAGTTTCTAGTGCTACTATTGACGACAACTCCACTTCAATAACTTACCAATCCCAAGGAGCAAAACCCATTTTGAGTCTTAATAATGACCAAGACATGGATCCTAAGCTCAAGCGGACCATTGCAAATCGATTGGCAGGACAGAGATCAAGAGATAAGAAAGCACAATATTTGGCCAATTTGGAATTCCAAGTTAAGGCCTATAAGGCTCAAATAGCCAATCTTCGGCAGCAAGTTGAATCCTATGAAAATCAAAAGCTCTTGATAATTTCGGAGAATGAGAAACTGGGTCGTGAATGTGAAACTCTTAGGTTCAAAACATTACTCACAGATGTTGAAATTCAGAAGAACATGGCTGAAGTGAATATGCTGAGGAAACTTCATACCATGCAGCTTGAGATGCAAGAACTGATGTTTTGTAATACTAGTCTCACGTCAATGCTCAATGGTCAAGTCTCAAATTATGATCCTAACACTTATCAAGTAAGAGGTTGA 624 0.3942 MEGGTKGNTVVTYSHMAPSKPLLVPGSPCLFGDQNEKYMVKNDTVSSATIDDNSTSITYQSQGAKPILSLNNDQDMDPKLKRTIANRLAGQRSRDKKAQYLANLEFQVKAYKAQIANLRQQVESYENQKLLIISENEKLGRECETLRFKTLLTDVEIQKNMAEVNMLRKLHTMQLEMQELMFCNTSLTSMLNGQVSNYDPNTYQVRG* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3956 207 CDD bZIP_plant_RF2 79 129 IPR044759 GO:0003700|GO:0006355
Lja3g3956 207 Pfam Basic region leucine zipper 79 127 IPR004827 GO:0003700|GO:0006355
Lja3g3956 207 Coils Coil 101 135 - -
Lja3g3956 207 PANTHER BASIC LEUCINE ZIPPER 34 54 181 - -
Lja3g3956 207 SMART brlzneu 74 138 IPR004827 GO:0003700|GO:0006355
Lja3g3956 207 PANTHER ACTIVATOR OF SPOMIN LUC3 54 181 - -
Lja3g3956 207 Gene3D - 79 130 - -
Lja3g3956 207 SUPERFAMILY Leucine zipper domain 79 132 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3956 76 154 bZIP Transcription Factor Family AT2G42380 36.250 1.15e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g3956 bZIP_2 8.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3956 - K10421 cam:101503209 106.686