Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3949 ATGTCGTCCTCTTCTGCCACTGCAACAACCCTCTTGTTCTCCACCGATCACCATGTTCCCCTCTCTCCTTCTCCAACCATTCCCAAATCCTTCACTCGCCTCTGCAAACCCTTCCATTCAAGAGTTCCCACCTCCATTCACTTCCATTGCGCTCGACCATCCTTCTTCGTCAGGGCCACTGTTATAAAGTGGCGATGTCCAAAGCAAACCCTCCCTCCCAAAGATACCGTTTTCAAAGAAAAAGTCATCCCTCCCAACGATACCGGTTTTGAAGAAAAAGTCCTATATCTTGAGTCTATCGGTATTGACTCTTTCTCACTCATTGAAAATCATCCAATGCTGATCACTGCATCACTGGCTGACATAAAATCCACTGTAGAATACATTACCTCCATGGATTTCTCTGCAATTGAGTTTCAGCGTATAGTTGGCATGTGTCCTGAGATTCTAACTACCAAAGTCTCAGACATCATACCTGTCTTCACGTTCCTTCACCGTGAAGTTCATGTAAAAGGCTCAGATATTAAGCGGGTCATAAATCGTCGTCCCAGGTTGATTGTCTGCAGTGTTAATAACCGACTCCGCCCTACCTTATACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAGTAAGCACACTGATTTGCTATCATGTAGTGTCGAAGATAAGTTTTTACCCAGGATTGATTACTTTGAGAATATTGGGTTTTCTCGCGATGATGCAACTTCAATGTTTCGAAGATTTCCTCAGTTGTTTTGTTGTAGTATTAAGAATAATTTGGAGCCCAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGAAAGAATTTCCACAGTATTTCTCATTTAGCTTAGAAAATAGAATTAAGCCTAGACATAAACAATGTGTAGAATTGGGGGTGTGTTTCACTCTCCCTGTGTTATTAAAGACAAGTGAAGTGACATTTAGAAATAGATTAGACTTATGTGTAAATTCTTCAACACCCTTGGAAACATCTCCTCTGTGGTGTACTGGTTTTCATGTTGATTAA 1044 0.4128 MSSSSATATTLLFSTDHHVPLSPSPTIPKSFTRLCKPFHSRVPTSIHFHCARPSFFVRATVIKWRCPKQTLPPKDTVFKEKVIPPNDTGFEEKVLYLESIGIDSFSLIENHPMLITASLADIKSTVEYITSMDFSAIEFQRIVGMCPEILTTKVSDIIPVFTFLHREVHVKGSDIKRVINRRPRLIVCSVNNRLRPTLYFLQSIGIEEVSKHTDLLSCSVEDKFLPRIDYFENIGFSRDDATSMFRRFPQLFCCSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKQCVELGVCFTLPVLLKTSEVTFRNRLDLCVNSSTPLETSPLWCTGFHVD* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3949 347 PANTHER OS03G0360600 PROTEIN 76 334 - -
Lja3g3949 347 PANTHER CGI-12 PROTEIN-RELATED 76 334 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 Pfam mTERF 96 207 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 Pfam mTERF 210 320 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 SMART mt_12 105 135 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 SMART mt_12 208 237 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 SMART mt_12 242 274 IPR003690 GO:0003690|GO:0006355
Lja3g3949 347 Gene3D Transcription termination factor 3, mitochondrial 154 327 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lja3g3949 mTERF 3.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3949 K15032 - gmx:100794678 565.844