Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3946 ATGGAGAAGCAGGCTATTCCAAATCAGACCTTGAGAGGCTTAATTAAGAAGGAAGCATGCCCTGGGACTGTGTCTTGTGCTGACATACTACCTCTTGCAGCTAGAAATCCTGTTCTTCTGGATGGTGGACCATTGTATCCAGTTTTAATAGGCAAAAGGGATAGCAATGAATCTTTTATTGAGGAAGCATTAGCAACTGATGAGAATCCGAAAAGTGATGACATGGACAACATTACATGCACACTGCATCTCTTTAGTCTCAGAAGAGCTAATGAAAGGGAAACAATGAGCCTTGCTGAAATTGGCAAAATTAGGTGTGATTTCATTCAGCAAGAGCCTCACCCCACCATAATTGCTCTTGATTTGGTTCGTCAGATAAAGCTACACTGCAAGAAGCATAACATGAAGAATAACAATATCTGCAGTGATAAGCTTTCCCCGCTTGTGATGTCAAAGCCAAAGCCAAAACCAAATCATATTGATAGTGGAATTGCTTTTTTTTTGCATTTTTCCAATTCCTTTTCTTTTAGCTTTGTATCTTCGCCGTTAGGGGCTCCGACTAAGGTGTACAACTTTTTGATAAATTTGATTTGA 594 0.3973 MEKQAIPNQTLRGLIKKEACPGTVSCADILPLAARNPVLLDGGPLYPVLIGKRDSNESFIEEALATDENPKSDDMDNITCTLHLFSLRRANERETMSLAEIGKIRCDFIQQEPHPTIIALDLVRQIKLHCKKHNMKNNNICSDKLSPLVMSKPKPKPNHIDSGIAFFLHFSNSFSFSFVSSPLGAPTKVYNFLINLI* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3946 197 Gene3D - 18 69 - -
Lja3g3946 197 PRINTS Plant peroxidase signature 42 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3946 197 PRINTS Plant peroxidase signature 23 33 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3946 197 SUPERFAMILY Heme-dependent peroxidases 2 109 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja3g3946 197 PANTHER PEROXIDASE 1 151 - -
Lja3g3946 197 Gene3D Peroxidase, domain 2 70 147 - -
Lja3g3946 197 PRINTS Haem peroxidase superfamily signature 42 54 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3946 197 PRINTS Haem peroxidase superfamily signature 24 41 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3946 197 PANTHER PEROXIDASE 25-RELATED 1 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3946 197 Pfam Peroxidase 17 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3946 197 ProSiteProfiles Plant heme peroxidase family profile. 11 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3946 Lja-Chr3 77786168 77791240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3946 2 110 Peroxidase AT4G33870 42.500 8.51e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3946 K00430 - lja:Lj0g3v0264119.1 360.918