Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3945 ATGCGAAGCTCCTTCACCGCATGGCTAGTGGTGGCGCTCGTCATCCCAGTGCTTCTCTCTCTCAGGAACCCACGAGGTGAAACCGATAGCACTGGAACCCGCAAAGCTTCTTCAACTCCACCTTCTTCGTATACGGTGAAGCTAGCCTCCACCACCAGAACCTTCGAGTTCAATGAGAGGATCAGAGATGGCTCCAATCTTGAATATGACTTTTACAGAGACACTTGTCCTCAGGCGGAGGACATTGTCCGCTCCGCCGTCACTCGCATCTACTTCGACCACCGTGATGTTTCCCCTGCTCTTCTCCGCCTCCTCTTCCATGATTGCTTCATCGAGGGTTGTGATGCTTCATTGCTGTTGGATGAAAATGGTGATAGAAACAGTTCAGTTGAGAAGCAGGCTATTCCAAATCAGACCTTGAGAGGCTTTGACCAAATTGACTTGATTAAGGAGGAGGTGGAGCAAGCATGTCCTGGGACTGTGTCTTGTGCTGACATACTAGCTCTCGCCGCAAGAGATTCCGTCCTTTTGGCTGGAGGACCATTCTATCCAGTTTTAACGGGAAGACGTGATAGCCGTCAATCTTATTTCGTGGAAGCAACTGATCAGATTCCAAGACCTGACGATAACGTTACGCGCACACTGCATCTCTTTAATCTCAGAGGATTTAATGAAAGAGAAACAGTCAGCCTTCTTGGAGGACATAACATTGGGAAAATAGGCTGTGATTTCATTCAGCAAAGGCTCTACAACTTCCAGGGCACAGGGAACCCAGACCCCAGCATACCTCTTGATTTCCTTCATCAGATGAGGCTAAACTGCCCAGACAACAACCACAATATCAGCAGCAGTGATGAGTTTTCCACGCTCGAGATTTCAAAGCCAATGCCTGTTCACTCTGACCAAAGCATGTCTTACAAGCAAGCATTGTCGTCTGCAGTATCATCAGGGGCAGCATTCGACACTCACTACTACCAGAGCTTGTTAAGAGGAAGAGGGCTACTATTCGCTGATCAGCAACTGATGGCCGAGGAGAGGACTGCCAGATTGGTTTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGGATTTTGCCAGGGTCATGTTGAAAATGTCTAATCTAGATGTTTTGACTGGAGCTCAAGGTCAGATTCGTCTGAAATGCTCGCAACTGATAAGTTCTTAA 1191 0.4777 MRSSFTAWLVVALVIPVLLSLRNPRGETDSTGTRKASSTPPSSYTVKLASTTRTFEFNERIRDGSNLEYDFYRDTCPQAEDIVRSAVTRIYFDHRDVSPALLRLLFHDCFIEGCDASLLLDENGDRNSSVEKQAIPNQTLRGFDQIDLIKEEVEQACPGTVSCADILALAARDSVLLAGGPFYPVLTGRRDSRQSYFVEATDQIPRPDDNVTRTLHLFNLRGFNERETVSLLGGHNIGKIGCDFIQQRLYNFQGTGNPDPSIPLDFLHQMRLNCPDNNHNISSSDEFSTLEISKPMPVHSDQSMSYKQALSSAVSSGAAFDTHYYQSLLRGRGLLFADQQLMAEERTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGAQGQIRLKCSQLISS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3945 396 CDD secretory_peroxidase 66 391 IPR033905 GO:0004601|GO:0042744
Lja3g3945 396 Gene3D Peroxidase, domain 2 210 373 - -
Lja3g3945 396 Pfam Peroxidase 83 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 Gene3D - 67 209 - -
Lja3g3945 396 PANTHER PEROXIDASE 25-RELATED 71 391 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PANTHER PEROXIDASE 71 391 - -
Lja3g3945 396 PRINTS Haem peroxidase superfamily signature 313 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Haem peroxidase superfamily signature 98 112 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Haem peroxidase superfamily signature 179 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Haem peroxidase superfamily signature 161 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 ProSiteProfiles Plant heme peroxidase family profile. 66 394 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 ProSitePatterns Peroxidases active site signature. 98 109 IPR019794 GO:0004601
Lja3g3945 396 SUPERFAMILY Heme-dependent peroxidases 67 392 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 76 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 226 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 160 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 100 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 327 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 179 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 141 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 311 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3945 396 PRINTS Plant peroxidase signature 368 381 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3945 Lja-Chr3 77767487 77770042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3945 63 394 Peroxidase AT4G33870 46.957 9.32e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3945 K00430 - gmx:100799801 621.313