Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3940 ATGAAGCAGTTGATTCGCCGCCTCTCCAAAGTGGCGGACTCCTCCCAGTACACTCTCCTCCGCCCGGACTCACCACGTAACCGGCGCCGGACGGAGTCCTTCCGCCTCTCCGCGTCGTCGAGGTTCCGCCGCTCGTCCTCCGCGGAGGTGCCGGAGGGACACGTGCCGGTCTACGTCGGCGACGAGATGGAACGTTTCGTCGTCTCCGCGGAGCTTCTCAACCATCCTGTCTTCGTGAAGCTTCTGAACCAGTCGGCCCAGGAGTACGGTTACGAGCAGAAAGGCGTGCTCCGGCTTCCGTGCCACGTCTTCGTCTTCGAGCGCGTGCTTGAGGCGCTCCACCTCGGCCACGACACGCGCCACCTCACCGAGCTTCTCAATTTCTCTTCGGAGGAGTTTTCGTAA 405 0.6272 MKQLIRRLSKVADSSQYTLLRPDSPRNRRRTESFRLSASSRFRRSSSAEVPEGHVPVYVGDEMERFVVSAELLNHPVFVKLLNQSAQEYGYEQKGVLRLPCHVFVFERVLEALHLGHDTRHLTELLNFSSEEFS* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3940 134 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 131 - -
Lja3g3940 134 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 131 IPR003676 GO:0009733
Lja3g3940 134 Pfam Auxin responsive protein 7 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3940 Lja-Chr3 77614018 77614911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3940 45 132 Calmodulin-binding Proteins AT4G31320 36.264 3.80e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3940 K14488 - gmx:100806044 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3940 3 77614018 77614911 Lja3g3940 3 77614018 77614911 ECH