Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3934 ATGCTCATGGATTATGCTCTCCTAGTAATGCTTCTCCTAACTTCAGCTGTGCAAAGTCACTCACATGCGCCTAGCACACTAGATACCTATATTGTGTATACTGGCAATAGCATGAATGATGAAGCTACTGCACTTTCCCTTCATGAAAGCATGTTACAGCAAGTTGCTGCAAACAGCAATGGAGCACCTAAATCTGTAACCCACCTCTATAAACGTAGTTTCAGTGGCTTTGCTGCAAAGCTAACCAGGGAAGAAGCAGATAAAATGGCTGGACTTGATGGGGTGGTGTCTGTCTTTCCTAGTACAAAGAAACAACTCCAGACAACCAAGTCTTGGGATTTTATTGGGTTTCCAATAAATGTGGAACGAAGGAATGCTGAAAGTGATATAATCATTGGAGTACTTGATTCTGGAATCTGGCCAGAATCTGAAAGCTTCCATGATAAAGGATTAGGTCCCCCACCCAGTAAATGGAAGGGAATCTGCCAATCTTCTTCCAATTTCACTTGCAACAATAAAATAATTGGTGCTAGATGTTACAGAGTTGAATCCTTGAACAAAGAACTCTTATCTCCAAGAGACACAATTGGTCATGGGACTCATACAGCATCAATAGCAGCTGGTAACCCCGTTAGCAATGCAAGCATGTTAGGCCTTGCAGAAGGAGTAGCAAGAGGAGGTGCTACCTCAGCACGTATTGCCGTGTACAAAGTCTGCTGGGACAATGGATGTGATGAAGCAGATATACTTTCTGCCTTTGATGACGGAATTGCAGACGGGGTTGACATATTTTCAGTCTCACTAGGAGCGAGTGACACCGCCAAGGTTGTAAGCTATTTTGAAAGCGGTATATCCATAGGAGCATTTCATGCAATGCGAAATGGAATACTGACAGTAACATCAGGAGGGAACTCAGGTCCAACACTTGGGGCTGTAGATAATGTCCAGCCTTGGTCAATCTCTGTGGCTGCTAGCACCATTGACAGGAAGTTTGTGACAAAAGTTAGATTAGGGGACAACAGAATTTATGAGGGAATCTCATTAAATACATTTGACCTTAAGGGAAAATTATACCCTCTAATCTTTGGGGGTGATGCACCCAATAAAGCAGGCATCGATGGATCTAAATCCAGGTTTTGCAGTCAAGGTACTTTGGATCAGAATTTGGTGAAGAATAAAATTGTTCTTTGCGAGGGCCTGTACCCAAATGAAACTGGACCCATTGGTTTCCTCTCAACCACTCAAATACCACTCGCAGCCGCTTATCCCTTGCCTGGATCTTACCTCGACTTCAAGGATGCTAGCCACACTAAAAGTGGAATGTTTCTTGAAACAACTTGCAGGGATTCAAGCGCCACAATATATAAGAGTGATGAGTTAGAAGATACTTCAGCCCCTGAGGTAGTCTATTTCTCATCAAGGGGTCCAAACATGATTACACCTGAAATTCTCAAGCCGGATTTGACTGCTCCTGGCGTAACCATCCTCGCTAGTTGGTCTCCAATATTTCCTGTTTCAAACTCTGATATTGACCACAGAGAGTTAAACTTCAATATCATGTCAGGAACCTCAATGTCTTGCCCACACGTGTCTGGTGTAGCAGGTTACATCAAATCATTTCATCCTACTTGGTCTCCTGCGGCTATTCGTTCAGCTCTAATGACAACAGCTGAACCCCTTAGTCCCTTGAATAACATAGAAGCAGAGTTGGCATATGGAGCAGGTCAAATTAGTCCTTCGAAGGCTTTGGCACCTGGTTTAGTATATGATCTTACTGAAAGGGACTACCTGAGTTTTTTGTGTGGCCAGGGCTATAACGCAATGTATATACAACTCATCACAGGGGATAATAGCAGCTCCTGTGCCACAAACAATGGATCGATCGCAAGGGATCTAAATTACCCTTCGTTTGCTCTTCAGGCCCCTCACACAGATCGTAAAGTATTTGCCAGGTTCAAAAGGACAGTCACAAATGTTGGCTCTCCAAAGTCCACATATAAAGCTACAGTGACTGCTCCTAGGGGACTAGAAATCAAAGTGGAGCCAAATGTTTTGCCATTCAATTCACTTGGCCAAAAGAAAACATTTGTGCTCACTATTGATGGAGCAATAACTGAACCTATAGTGTCAGCTTCTTTAGTTTGGGACGATGGTGGATTCCAAGTGAGGAGCCCGATTGTTGTGTATGATGTAGTGGGTTTTAACTCATCCACACATGCTTCTCATTCCACATCTTTTTCTCCTAGTCTCTCTTTGCTTTTCCTATCTCTCATTTCTTTCACCCACTTATATCTTTTGGGTGTGTATGAATAA 2313 0.4306 MLMDYALLVMLLLTSAVQSHSHAPSTLDTYIVYTGNSMNDEATALSLHESMLQQVAANSNGAPKSVTHLYKRSFSGFAAKLTREEADKMAGLDGVVSVFPSTKKQLQTTKSWDFIGFPINVERRNAESDIIIGVLDSGIWPESESFHDKGLGPPPSKWKGICQSSSNFTCNNKIIGARCYRVESLNKELLSPRDTIGHGTHTASIAAGNPVSNASMLGLAEGVARGGATSARIAVYKVCWDNGCDEADILSAFDDGIADGVDIFSVSLGASDTAKVVSYFESGISIGAFHAMRNGILTVTSGGNSGPTLGAVDNVQPWSISVAASTIDRKFVTKVRLGDNRIYEGISLNTFDLKGKLYPLIFGGDAPNKAGIDGSKSRFCSQGTLDQNLVKNKIVLCEGLYPNETGPIGFLSTTQIPLAAAYPLPGSYLDFKDASHTKSGMFLETTCRDSSATIYKSDELEDTSAPEVVYFSSRGPNMITPEILKPDLTAPGVTILASWSPIFPVSNSDIDHRELNFNIMSGTSMSCPHVSGVAGYIKSFHPTWSPAAIRSALMTTAEPLSPLNNIEAELAYGAGQISPSKALAPGLVYDLTERDYLSFLCGQGYNAMYIQLITGDNSSSCATNNGSIARDLNYPSFALQAPHTDRKVFARFKRTVTNVGSPKSTYKATVTAPRGLEIKVEPNVLPFNSLGQKKTFVLTIDGAITEPIVSASLVWDDGGFQVRSPIVVYDVVGFNSSTHASHSTSFSPSLSLLFLSLISFTHLYLLGVYE* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3934 770 Pfam Subtilase family 128 575 IPR000209 GO:0006508|GO:0008236
Lja3g3934 770 Pfam Fibronectin type-III domain 631 728 IPR041469 -
Lja3g3934 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
Lja3g3934 770 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Lja3g3934 770 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Lja3g3934 770 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Lja3g3934 770 SUPERFAMILY Subtilisin-like 106 587 IPR036852 GO:0004252|GO:0006508
Lja3g3934 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 729 IPR045051 -
Lja3g3934 770 ProSiteProfiles Serine proteases, subtilase domain profile. 111 583 - -
Lja3g3934 770 PANTHER PUTATIVE-RELATED 19 729 - -
Lja3g3934 770 Gene3D Peptidase S8/S53 domain 129 596 IPR036852 GO:0004252|GO:0006508
Lja3g3934 770 Gene3D - 328 461 - -
Lja3g3934 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 107 IPR037045 -
Lja3g3934 770 CDD Peptidases_S8_3 104 557 IPR034197 -
Lja3g3934 770 Gene3D - 600 732 - -
Lja3g3934 770 CDD PA_subtilisin_like 335 434 - -
Lja3g3934 770 Pfam Peptidase inhibitor I9 29 106 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3934 Lja-Chr3 77447028 77453428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3934 30 729 Subtilisin-like Serine Gene Family AT5G59100 47.067 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3934 - - gmx:100784447 940.643