Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3916 ATGAAATCCTCAAGAGAAAAAGAAAACAACCGCTGCATCAGTTGGCACATCCACACCCTCCATAATCGTCTTCTCCACGCCTTAAACCTTGGCACCAGGCATTTTGATGAGAAGACAGATAGATGGAAGTGGCAGTGTGCCAACCTTGAAGTGCAGAAAAATGTTCTGCGATCCATGGACGCGTTTCTTGATTCGATATCAGGAGATGCACGGGCCGTACGCCATACTATTGTTAAGGAATCTGTTGGTGAGGTTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGGCCCTTTGTTAAGCATGGCATCGAATGTGGCGTTGAAGTTAGTTAGTGTTTTACCAAATCTGCTATTGCAATCACATTTGCTGGATCTTGTGTCTTGTCTATCATCCTTGTTGTCTTCACATCAAGTTGAAGTTGCAGTACCCTGTGCAACTGCTTTGAATTTGGTAATCTCAAATTTGAGTGCTACGAAGGAGAAAGCAGTTATGGAAGCATTGAAAGAAAAAGAGATTTCCATTTGTATTGTTGGAAATATAAAGGATTTTGCTGGAGGTGCGAAGAAAATCGGATACTTTGAAGAGATGGCTTCACTTTTGAGCACAATACTGTTGCGGTGGCCTTCGTCTAGGTTCCCTGTTTGTAATGATGTTAAACTTATGGAATGTTTAGCAAACATGCATACAGGGACAGATAGTTCTACCAAACTTGTAATTTTAAAACTATACACGTCATTAGCTTTATGTGGCTCTGTGGCGAAAAAACTTATGGAGGATGGAAAAGTATTTCTACAAATGGTTGTGCGGGCAATGGGAAAATCAAACCCTCATGATGTTCAGATAGAGGGGTTTAAGCTTGCTCGATGTCTATTTAGATCCCAAGAGAATTGTTTGCAAGTGGTGGATTTGTGTGGTGAAGCTCTTGTTGAGGCCATAATTTGTGGGATGAGAGAAACAGGTCCGATTTCCCAGAAAAATGGGAACAACCATGGCTCTTTATTAATGGAAGCATGTCAGTTGGCTCTTATAACACGTTGGGCTGGTGATCATCATATCAGTTTTTGGAAACAAAGAATTGACAGAGTCCTCCTTAATCTTCTGATTGAAAATATTCAAGACCAATCATCAGAACTTGTCTTGTCATTGGATAAACAAATATCCTTGGTGAAGGAGGGATTAAAATCCAACTATCAACTTGGTCTGAGGAGTTATGTGTGGGACATTCTTGGGTGTCTTATGATACATTATGGAGAAAGTACCCCTGGGACTGGGAGTAAGCTCCACATCAACTTACTAATTATGTGTGCATGCTTGACGTTTGCGGATACAATTCAAAATTGGTGCCGAATATGTCAAAAGGATGTTGATGATAATCTTCAAAGCGAACCAGTATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTGATTACATTTCCTCACGTGCTAGATTCTTGTTATCTGATATACTGAAGGTGAGAGGCATGACATGCTTGGAAAACATAATGCATACTTTAGATTATACATCATCCCTAGAAAGCTATGGTTCGTTTGATAAACTTCAACTTGTTATTAACTTAATTGGGTTAACTTGTCTCTCAAGTTTAACACAGTATCAAAGATGTATCATTGAAAGCAAAGGGATAAAGGCAGTTGTTCTTCTTTTGAAACGATGCTTAAGTATTGACATTCATGTCGAAAGGCCTGAAATTGCTCCTCATTTGTATACAACATTCTATGAAAGGTCTTGTTGTTGGATTGGTAGAGGAGATTGGGAAGGTTCCAATGTTCTTTTATTTTATTGTTTGTGGGGCTTAGCTGAATTTCTTCATCAATGTGGCCTTTTACATGACAAAGATCCGCAATTTACTACAGAAGTGACTAACATTAAAGCTCAATTAGTTACCAAACTTCATGAGATCTACAGTAGCACTTCTTTCAGTCCAGGAGTGAAATGGTATGTTTCTTATATTCTAAGTCATTTCGGATTCTATGGTTTCCCAAATGAATTTGCCAAAAGGATTGGGAAATCTTTTAATAAGGAGGAATATGCAGATTTGCTACTTGTAGCAAATGGGGGTTCTGTGAGTGTTCATGGTATTATCCTTGCTGTTCGATGCCCATCACTTCTGCCACCTGAAGTCTTATCTAGTAGTAAAAGTTCTAAAGAAGTAACACAGAAGTTTGTTGGAGAGACCATGAGGGAAGTTCGTTTATCTTCTCGTGTTGATTATGAAGCATTGTTGATGTTGTTGGAATATGTATACTTGGGATCCTTACATGCGGGAGAAGAAATGGTAAAGAAGCTGAAGATTCTTGCTAGTCGCTGTAATCTACAGCCTCTGTTTCAAATGCTTTGCAGAGAACGTCCAAATTGGGGCAGACCTTTCCCCAGCTCTAATCTTACTTCATCTCTTGATTCAGCTGGAAGTTGTTTTTCAGATGTCATATTGGAAGCTAAATCAAATAAACTTGTTGGATGGGCATGCAATATTTGTTCTCACTCGGTACCACATGTGCATGTTCACAAAGTTATCTTGCAGTCTGGCTGTGATTATTTACAGGGTCTGTTCCGATCAGGAATGAAAGAGAGTCATTTACCAGTCATAAAGGCTCCTATTAGCTGGGAAGCTTTGATGAAACTAATACATTGGTTTTATTCTGATGAGCTGCCAAATCCTCCCTCTGGATGTTTGTGGGTTAATATGGATGATGAAGAAAAGCTATTCAATCTGCAACCATATGTGGAGCTCTGTTGGCTTGCTGAGTTCTGGATTTTGGAAAATATTCAGGAAGCCTGCTGGAATGTGATTATGTCTTGTCTTGATTCTTCTGTGCAGTTGGCCTTTAAAGTAATCAAAATGGCATATGAGCTCTCTTTGTGGAAGTTAGTTGACATTGCTGCAAATCTCATGGCTCCTTCATATAGGCAATTGCTAAATTCTGGTGAACTTGAAGAATTTGATGACGCGCTAGTTCAAATAATTTATTCTGCTTCACTTCGACTTAACCAGGAAGGCAAAAATTGCTTTAGGTGA 3045 0.3915 MKSSREKENNRCISWHIHTLHNRLLHALNLGTRHFDEKTDRWKWQCANLEVQKNVLRSMDAFLDSISGDARAVRHTIVKESVGEVLGALLWILQCKSGPLLSMASNVALKLVSVLPNLLLQSHLLDLVSCLSSLLSSHQVEVAVPCATALNLVISNLSATKEKAVMEALKEKEISICIVGNIKDFAGGAKKIGYFEEMASLLSTILLRWPSSRFPVCNDVKLMECLANMHTGTDSSTKLVILKLYTSLALCGSVAKKLMEDGKVFLQMVVRAMGKSNPHDVQIEGFKLARCLFRSQENCLQVVDLCGEALVEAIICGMRETGPISQKNGNNHGSLLMEACQLALITRWAGDHHISFWKQRIDRVLLNLLIENIQDQSSELVLSLDKQISLVKEGLKSNYQLGLRSYVWDILGCLMIHYGESTPGTGSKLHINLLIMCACLTFADTIQNWCRICQKDVDDNLQSEPVSRAVLMMIYSPCDYISSRARFLLSDILKVRGMTCLENIMHTLDYTSSLESYGSFDKLQLVINLIGLTCLSSLTQYQRCIIESKGIKAVVLLLKRCLSIDIHVERPEIAPHLYTTFYERSCCWIGRGDWEGSNVLLFYCLWGLAEFLHQCGLLHDKDPQFTTEVTNIKAQLVTKLHEIYSSTSFSPGVKWYVSYILSHFGFYGFPNEFAKRIGKSFNKEEYADLLLVANGGSVSVHGIILAVRCPSLLPPEVLSSSKSSKEVTQKFVGETMREVRLSSRVDYEALLMLLEYVYLGSLHAGEEMVKKLKILASRCNLQPLFQMLCRERPNWGRPFPSSNLTSSLDSAGSCFSDVILEAKSNKLVGWACNICSHSVPHVHVHKVILQSGCDYLQGLFRSGMKESHLPVIKAPISWEALMKLIHWFYSDELPNPPSGCLWVNMDDEEKLFNLQPYVELCWLAEFWILENIQEACWNVIMSCLDSSVQLAFKVIKMAYELSLWKLVDIAANLMAPSYRQLLNSGELEEFDDALVQIIYSASLRLNQEGKNCFR* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3916 1014 Pfam BTB/POZ domain 679 787 IPR000210 GO:0005515
Lja3g3916 1014 Pfam BTB/POZ domain 841 907 IPR000210 GO:0005515
Lja3g3916 1014 ProSiteProfiles BTB domain profile. 687 766 IPR000210 GO:0005515
Lja3g3916 1014 SUPERFAMILY POZ domain 814 941 IPR011333 -
Lja3g3916 1014 SUPERFAMILY ARM repeat 80 671 IPR016024 -
Lja3g3916 1014 SMART BTB_4 816 944 IPR000210 GO:0005515
Lja3g3916 1014 SMART BTB_4 687 796 IPR000210 GO:0005515
Lja3g3916 1014 Gene3D Potassium Channel Kv1.1; Chain A 803 985 IPR011333 -
Lja3g3916 1014 CDD BTB_POZ_ZBTB_KLHL-like 815 893 - -
Lja3g3916 1014 Gene3D Potassium Channel Kv1.1; Chain A 663 792 IPR011333 -
Lja3g3916 1014 SUPERFAMILY POZ domain 664 789 IPR011333 -
Lja3g3916 1014 ProSiteProfiles BTB domain profile. 816 897 IPR000210 GO:0005515
Lja3g3916 1014 PANTHER OS06G0674800 PROTEIN 1 1009 IPR044953 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lja3g3916 BTB 3.2e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3916 - - gsj:114385670 1530