Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3883 ATGGCATTGAAGTGGTGTTTGAGTTTCCATTCTCATACTGGGTTTTACATGATGCTATTGTTTTGCCTTGTAAGTTCAATTAATGAAGAGGGTTCAAGCCTTTTGAAGTTTAAGAGGTCCCTTTTAGACCCAGATAACAATCTTCATAACTGGAATCCTTCTCATTTCACTCCTTGCAATTGGACTGGTGTGTACTGCACAGGTTCATTGGTAACTTCTGTAAAACTCTACAACCTTAATCTTTCTGGTACTTTGTCTCCTAGCATCTGTAATCTTCCATGGCTACTTGAGTTGAATCTATCAAAAAATTTCATATCTGGCCCAATTCCTGAAGGTTTTGTTGACTGCAGTAGATTAGAGGTTTTAGACCTTTGTACAAATAGGCTTCATGGACAGCTTTTAGCTCCTATTTGGAAAATCACAACACTTAGAAAGCTTTATCTGTGTGAAAATTACATGTATGGTGAAGTTCCAGAAAAGGTTGGGGATTTAACATCACTTGAAGAGCTAGTTATTTATAGCAATAACTTAACTGGAAGAATTCCCACTTCAATTAGTAAGTTGAAGCAGCTTAGAGTTATTAGGGCGGGTTTGAATGGCCTCTCAGGGCCCATACCTGCAGAAATCAGTGAGTGTGAGAGCTTGGAGACATTGGGATTGGCTCAGAATCAACTTGTAGGTTCTATACCAAGGGAGCTCCAAAAGCTTCAGAACCTTACCAATTTGATTTTATGGGAAAACTCTTTATCTGGGGAGATTCCTCCTGAGATTGGAAATATTAGTAGCCTGGAGTTGCTTGCTTTGCATCAAAATTCATTTAGTGGTGCGATCCCGAAGGAGCTGGGAAAGCTGTCCGGGTTGAAGAGGCTGTATGTGTACACCAACCAGCTGAATGGCACAATCCCAACAGAGCTAGGGAACTGTACAAATGCTATTGAGATAGATCTTTCTGAAAACCGTTTGATCGGGATCATTCCCAAGGAGTTGGGCCAGATCTCTAATCTTAGCTTGCTCCATCTATTTGAAAACAACCTACAGGGTCATATTCCAAGGGAGCTTGGGAGCTTGAGGCAGCTAAAAAAATTAGACCTATCGCTGAATAACTTAACAGGTACGATTCCCCTGGAGTTTCAAAACCTTACGTATATCGAGGATTTGCAGTTATTCGACAATAAACTTGAGGGTGTGATTCCTCCTCATCTCGGAGCTCTTAGAAACCTTACTATTCTTGATATATCTGCAAATAATCTTGTTGGTATGATACCTGTCCATCTTTGTGAATTTCAGAAGCTACAATTCTTGAGCCTCGGATCAAATAGGTTGTTTGGAAATATCCCTTATAGCCTGAAAACTTGCAAGTCTCTTGTGCAGCTAATGCTGGGGTTTAACCAGTTGACAGGAAGCCTACCTGTTGAATTTTATGAACTTCAAAATCTTACTGCTCTTGAACTTTATCAGAATCGGTTCTCTGGGCGAATCAACCCAGGGATAGGACAGCTTACGAAGTTAGAGAGGCTTCTCTTGTCAGATAACTATTTTTCTGGGCATCTCCCTTCTGAGATTGGAAATTTGGCACAACTTGTCACATTCAATATTTCCTCTAATCATTTCAGTGGAAGTATTCCTCATGAGTTGGGAAACTGTGTAAATCTGCAGAGGCTTGATCTCAGCAGGAACCAGTTCACTGGTATGTTTCCGAATGAAATTGGCAATCTGGTGAATCTGGAGCTGTTGAAAGTTTCTGATAACATGCTCTCTGGGGAAATACCAGCCACTTTGGGGGATCTTATTCGTCTCACTGGCCTTGAGCTAGGTGGCAACCAATTTTCAGGAAACATCTCTTTTCGTTTTGGAAGACTTGCTTCTCTCCAGATTTCCCTTAACTTGAGCCACAACAAACTTTCGGGCACAATTCCTGACAGCCTAGGGAACTTGCAAATGCTAGAATCACTTTACTTGAATGACAATCAACTAGTTGGTGAAATTCCTGCATCAATTGGTGACCTGCTTAGTCTTGATGTATGCAATGTATCTAACAATAAGCTGATAGGAACTGTTCCAGACACCACTGCATTTAGGAAGATGGATTTCACAAATTTTGCTGGGAACAATGGGTTGTGCCGTGCAGGTACATACCACTGTCATCCATCTGTCGCTCCATTTCATCGTGCAAAACCAAGTTGGATCCAAAAGGGTTCAACAAGGGAAAAGATAGTGAGCATTGTTTCTGGGGTGGTTGGACTAGTTTCTCTTATTTTCATAGTCTGCATATGCTGGACCATGAGGCGCAATAACACTTCTTTTGTTTCACTTGAAGGGCAGCCAAAGCCTCATGTCCTAGATAATTATTACTTTCCAAAAGAAGGCTTCACATACCTGGATCTCTTGGAAGCCACTGGCAATTTTTCAGAAGATGCAGTTATAGGAAGTGGAGCTTGCGGCACCGTCTACAAGGCTGTTATGAATGATGGTGAAGTGATTGCGGTCAAGAAGCTGAATTCACGTGGAGAAGGAGCAACCGTTGACCGAAGCTTCCTTGCAGAGATTTCAACCCTTGGAAAGATCAGACATAGGAACATTGTGAAGCTGCATGGATTTTGTTATCATGAGGATTCAAATCTTCTCTTGTATGAATACATGGAAAATGGGAGCCTCGGTCAACAACTTCATTCAAATGCAACCGCGTGTGCACTGAACTGGAATTGTCGATACAACATTGCTCTAGGAGCAGCAGAAGGCTTGTCCTATCTTCATTCTGATTGTAAACCTAAGATCATCCATCGCGATATTAAGTCAAACAACATTTTGCTTGATGAAGTGTTTGAGGCTCATGTTGGAGACTTTGGCTTGGCAAAGTTGATTGACTTTTCCTTATCAAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATCTATAGTTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAGGGTGGTGATTTAGTGAGTTGGGTGAGAAGAGCAATTCAAGCATCCGTACCGACATCTGAGTTATTTGACAAGCGATTGGATCTGAGTGAACCGAGAACAGTTGAAGAGATGTCTCTTATTCTCAAGATTGCTTTGTTTTGCACCAGTGCATCTCCACTTAACAGGCCTACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGGGAATATGTCAGCCATTCCCCAACCTCTCCTACATCAGAATCTCCACTGCATGAAGATGAAGATGGTGGTCTGGAGGTGTAA 3318 0.4183 MALKWCLSFHSHTGFYMMLLFCLVSSINEEGSSLLKFKRSLLDPDNNLHNWNPSHFTPCNWTGVYCTGSLVTSVKLYNLNLSGTLSPSICNLPWLLELNLSKNFISGPIPEGFVDCSRLEVLDLCTNRLHGQLLAPIWKITTLRKLYLCENYMYGEVPEKVGDLTSLEELVIYSNNLTGRIPTSISKLKQLRVIRAGLNGLSGPIPAEISECESLETLGLAQNQLVGSIPRELQKLQNLTNLILWENSLSGEIPPEIGNISSLELLALHQNSFSGAIPKELGKLSGLKRLYVYTNQLNGTIPTELGNCTNAIEIDLSENRLIGIIPKELGQISNLSLLHLFENNLQGHIPRELGSLRQLKKLDLSLNNLTGTIPLEFQNLTYIEDLQLFDNKLEGVIPPHLGALRNLTILDISANNLVGMIPVHLCEFQKLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGFNQLTGSLPVEFYELQNLTALELYQNRFSGRINPGIGQLTKLERLLLSDNYFSGHLPSEIGNLAQLVTFNISSNHFSGSIPHELGNCVNLQRLDLSRNQFTGMFPNEIGNLVNLELLKVSDNMLSGEIPATLGDLIRLTGLELGGNQFSGNISFRFGRLASLQISLNLSHNKLSGTIPDSLGNLQMLESLYLNDNQLVGEIPASIGDLLSLDVCNVSNNKLIGTVPDTTAFRKMDFTNFAGNNGLCRAGTYHCHPSVAPFHRAKPSWIQKGSTREKIVSIVSGVVGLVSLIFIVCICWTMRRNNTSFVSLEGQPKPHVLDNYYFPKEGFTYLDLLEATGNFSEDAVIGSGACGTVYKAVMNDGEVIAVKKLNSRGEGATVDRSFLAEISTLGKIRHRNIVKLHGFCYHEDSNLLLYEYMENGSLGQQLHSNATACALNWNCRYNIALGAAEGLSYLHSDCKPKIIHRDIKSNNILLDEVFEAHVGDFGLAKLIDFSLSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVSWVRRAIQASVPTSELFDKRLDLSEPRTVEEMSLILKIALFCTSASPLNRPTMREVIAMLIDAREYVSHSPTSPTSESPLHEDEDGGLEV* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3883 1105 Gene3D Phosphorylase Kinase; domain 1 773 879 - -
Lja3g3883 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Lja3g3883 1105 Gene3D Ribonuclease Inhibitor 26 179 IPR032675 -
Lja3g3883 1105 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Lja3g3883 1105 Gene3D Ribonuclease Inhibitor 180 276 IPR032675 -
Lja3g3883 1105 SMART serkin_6 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3883 1105 SUPERFAMILY L domain-like 497 689 - -
Lja3g3883 1105 Pfam Protein kinase domain 803 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3883 1105 Gene3D Ribonuclease Inhibitor 379 718 IPR032675 -
Lja3g3883 1105 Pfam Leucine Rich Repeat 550 572 IPR001611 GO:0005515
Lja3g3883 1105 Pfam Leucine Rich Repeat 358 380 IPR001611 GO:0005515
Lja3g3883 1105 PANTHER OS07G0152200 PROTEIN 18 1086 - -
Lja3g3883 1105 SMART LRR_typ_2 284 308 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 404 428 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 164 188 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 356 379 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 572 596 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 620 644 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 500 524 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 236 260 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 645 669 IPR003591 -
Lja3g3883 1105 SMART LRR_typ_2 548 571 IPR003591 -
Lja3g3883 1105 SUPERFAMILY Protein kinase-like (PK-like) 779 1075 IPR011009 -
Lja3g3883 1105 Gene3D Ribonuclease Inhibitor 277 378 IPR032675 -
Lja3g3883 1105 Gene3D Transferase(Phosphotransferase) domain 1 880 1092 - -
Lja3g3883 1105 SUPERFAMILY RNI-like 252 562 - -
Lja3g3883 1105 MobiDBLite consensus disorder prediction 1083 1105 - -
Lja3g3883 1105 SUPERFAMILY L domain-like 29 298 - -
Lja3g3883 1105 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 1086 - -
Lja3g3883 1105 ProSiteProfiles Protein kinase domain profile. 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3883 1105 ProSiteProfiles Leucine-rich repeat profile. 358 379 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3883 Lja-Chr3 76502094 76507424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3883 52 1093 Receptor kinase-like Gene Family AT1G73080 37.845 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja3g3883 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3883 - - gmx:100818311 1850.87