Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3880 ATGGCGGACGAGGTGGTTTTGTTGGATGTCTGGGCCAGCATGTTTGGTATGAGGGTGAGGATTGCATTAGCTGAAAAGGGTGTTGAGTATGAGTACAAGGAAGAGAATCTCAGGAACAAGAGTGATTTGCTTCTGCAAATGAATCCAGTTCACAAGAAGATCCCAGTTCTCATCCATAATGGCAAACCCATTTGTGAATCTGCAATTATTGTGCAGTACATAGATGAGGTTTGGAAGGACAAAGCTCCAATCTTGCCCTCTGACCCTTATGAGAGAGCTCAAGCTAGATTCTGGGTGGATTACATTGACAAAAAGGTATATGATACTTGGAGGAAAATGTGGCTTTCAGAAGGAGAAGAGCATGAGGCAGGGAAGAAGGAGTTGATTTCTATCTTTAAGCTGCTAGAGGAGACACTGGGTGACAAATCATTTTATGGGGGTGACACCTTTGGGTTTCTTGATCTTGGTCTGATCCCATTTTATACCTGGTTTTATACTTTTGAGACGTTTGGCAACTTCAAAATGGAAACAGAGTGTCCTAAACTGATGGATTGGGTCAAGAGATGCATGCAGAAAGAGACTGTGTCCAAAACTCTTCCTGATGAGAAGAAGCACTTGCTAGTTGCTATGGAGGACAAAGTCAAGGTGATTTTGTTGGGCTCAGGGTTCAGTATGTTTGGGATGAGAGCCATGATAGCTTTGGAAGATAAAGGAATCAAATATGAGTACATGGAGCAGGATCTTACCAACAAGAGCCCTTTGCTTTTAGAAATGAATCCAATTCACAAGAAGATCCCAGTTCTCATACATCATGGAAGACCCATCTGTGAGTCCCTCATAATTGTTGAGTATATTGATACAGTTTGGAAAAGCAATGCTCCACTTCTTCCCTCTGATCCCTACCAAAGAGCTCAAGCCAGGTTCTGGGCTGATTTTATTGATCAGAAGGTATATCATGCTTCTAGGAGAATATGGACTACAGATGGAGATAAAAAAGAGGTGGCAAAGAAGGAGTTCTTTGAGAGCTTAAAGCAATTGGAGGAGGTTCTTGGAGATAAGCCATATTTTGGGGGTGACACGTTTGGGTTTGTGGATGTTGCTCTCATCCCTTTCTATTGTTGGTTTTATACTTATGAGACCTTTGGAGGCTTCAAAGTGGAGGCAGAGTGTCCAAAACTTATCTCATGGGCTAAGAGATGCATGCAGAAAGAGAGTGTATCTAAAACTCTTGTAGATGAAAAGGAAGTTTATGAGTCTGTTTTAGATTACAAGAAGAAATTTGTGCTGAGCTAG 1293 0.4176 MADEVVLLDVWASMFGMRVRIALAEKGVEYEYKEENLRNKSDLLLQMNPVHKKIPVLIHNGKPICESAIIVQYIDEVWKDKAPILPSDPYERAQARFWVDYIDKKVYDTWRKMWLSEGEEHEAGKKELISIFKLLEETLGDKSFYGGDTFGFLDLGLIPFYTWFYTFETFGNFKMETECPKLMDWVKRCMQKETVSKTLPDEKKHLLVAMEDKVKVILLGSGFSMFGMRAMIALEDKGIKYEYMEQDLTNKSPLLLEMNPIHKKIPVLIHHGRPICESLIIVEYIDTVWKSNAPLLPSDPYQRAQARFWADFIDQKVYHASRRIWTTDGDKKEVAKKEFFESLKQLEEVLGDKPYFGGDTFGFVDVALIPFYCWFYTYETFGGFKVEAECPKLISWAKRCMQKESVSKTLVDEKEVYESVLDYKKKFVLS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3880 430 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 299 427 IPR010987 -
Lja3g3880 430 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Lja3g3880 430 Pfam Glutathione S-transferase, N-terminal domain 216 286 IPR004045 -
Lja3g3880 430 SUPERFAMILY GST C-terminal domain-like 289 427 IPR036282 -
Lja3g3880 430 SFLD Main (cytGST) 214 428 - -
Lja3g3880 430 Gene3D - 299 430 - -
Lja3g3880 430 Gene3D - 88 213 - -
Lja3g3880 430 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 210 - -
Lja3g3880 430 CDD GST_N_Tau 216 289 - -
Lja3g3880 430 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lja3g3880 430 CDD GST_N_Tau 5 78 - -
Lja3g3880 430 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 215 423 IPR045073 -
Lja3g3880 430 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lja3g3880 430 CDD GST_C_Tau 89 206 IPR045074 GO:0004364|GO:0006749
Lja3g3880 430 SFLD Main.3: Omega- and Tau-like 214 428 IPR045073 -
Lja3g3880 430 SFLD Main.3: Omega- and Tau-like 2 207 IPR045073 -
Lja3g3880 430 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Lja3g3880 430 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 214 293 IPR004045 -
Lja3g3880 430 SUPERFAMILY GST C-terminal domain-like 76 206 IPR036282 -
Lja3g3880 430 SFLD Glutathione Transferase (cytosolic) 2 207 IPR040079 -
Lja3g3880 430 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 215 423 - -
Lja3g3880 430 SUPERFAMILY Thioredoxin-like 215 318 IPR036249 -
Lja3g3880 430 CDD GST_C_Tau 300 423 IPR045074 GO:0004364|GO:0006749
Lja3g3880 430 Gene3D Glutaredoxin 214 298 - -
Lja3g3880 430 Gene3D Glutaredoxin 1 87 - -
Lja3g3880 430 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Lja3g3880 430 Pfam Glutathione S-transferase, C-terminal domain 335 399 - -
Lja3g3880 430 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3880 Lja-Chr3 76470963 76484040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3880 215 428 Glutathione S-transferase Gene Family AT1G78380 62.150 2.91e-96 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3880 K00799 - gmx:548030 389.037