Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3874 ATGGCTTCTTTCCAAAACTTCAACTTCGAAGCCCAAATTCCATCAGAGCTCCTGATATCTCAGATCATGCAACTTCACGCAGCAATCTCCAAGCTTGAATCTCTCAAGCCTTCTAAGCAAGTCAACACCCTCTTCACTCACCTAGTGAAACTCTGCACCCTCCCTTCATCCATTGACATTGAAGCCTTGCCCCATCAAGTACAAATCATGCGTGAGAGCCTCATTGGCCTCTGTGGCCGCGCCGAAGGGCTTCTAGAACTTGAATTCTCAACATTCATTAACAACACACCAAACCCTTTGAACAATTTAACCCTCTTCCCTTACTATGGGAACTATGTCAAACTAGCAAACTTGGAGAACAAAATCCTCAAAGATAATGGGGTTATGCATGCAAAGAAGGTAGCATTTATTGGGTCTGGTCCAATGCCACTCACTTCAATCATCATGGCAACTCATCACATGGAATCAACTCACTTTGATAACTTTGACATTGATGAGAAGGCGAACGAGGCGGCTCGCAAGATCGTTGCTTCGGACGGGGTGCTTGAGAAGAGGATGAAGTTTGAGACACGAGACATCATGGACTTGAGGGAGAGATTGGGGGAATATGATTGCATCTTTTTGGCTGCACTTGTGGGTATGAGCAGGGTAGAGAAAGTGAAGATCATGGGACACATTAGAAAGTATATGAAGGAGGGAGGTGTTTTGCTTGTGAGAAGTGCAAAAGGGGCTAGAGCTTTCTTGTACCCGGTTATTAAGGAGCATGATATGGTGGATTTTGAGGTGCTTACCATCTTTCATCCCACAAACGATGTGATCAACTCAGTTGTCCTTCTTCGCAAGCCTGAAGCTTAG 855 0.4503 MASFQNFNFEAQIPSELLISQIMQLHAAISKLESLKPSKQVNTLFTHLVKLCTLPSSIDIEALPHQVQIMRESLIGLCGRAEGLLELEFSTFINNTPNPLNNLTLFPYYGNYVKLANLENKILKDNGVMHAKKVAFIGSGPMPLTSIIMATHHMESTHFDNFDIDEKANEAARKIVASDGVLEKRMKFETRDIMDLRERLGEYDCIFLAALVGMSRVEKVKIMGHIRKYMKEGGVLLVRSAKGARAFLYPVIKEHDMVDFEVLTIFHPTNDVINSVVLLRKPEA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3874 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Lja3g3874 284 CDD AdoMet_MTases 162 238 - -
Lja3g3874 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 241 IPR029063 -
Lja3g3874 284 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
Lja3g3874 284 Gene3D Vaccinia Virus protein VP39 16 282 IPR029063 -
Lja3g3874 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Lja3g3874 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3874 Lja-Chr3 76342958 76344086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3874 15 281 Nicotianamine Synthase Gene Family AT5G56080 51.661 1.06e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3874 K05953 - gmx:100819726 463.766