Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3836 ATGGCCAGTTTTGTTTTAGGGTCTAATAAAACAGTCCATGCCTTGGGCTGGTTCTGTCTCCTATTGATGGTGCATAAGAGTGCTGCCTATGAGTTCGTTGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAAGTGATCCCAATTTCAATCCTTTCAATCAATGGGCAGAGAAAAGCCGTTTTCAAGTAGGAGACTCCCTAGTGTTCAACTACCAATCTGGCCAAGACTCAGTGCTTTATGTGAAGAGTGAAGACTATGCCAGTTGCAACACAGGTTCAGCTTATGCAAAATATTCTGATGGCCACACAGTGTTCAAACTCAACAAATCAGGGCCTTATTTCTTCATCAGTGGAAACAAAGACAAGTGTAACAAAAACGAGAAGCTAGCAGTGATTGTGCTGGCTGACAGGAGCAACAGTAACTCATCAAACACCAACCAAACAACCACCGCTTCTCCACCGTCACCACAGTCGTCATCATCATCACCTCCTTCACCAGCACCTTCAAAGCAAGAAGGCCAATCTCCACCACCAGCAGATACAAACACAACACCATCACCAGCCAGTGACCATGATCATCCTTCTCCTCCTAATGGTGCTGCTTCACTCTTTATCAGCTTGGGAGGCTCTGCTGCAACATTCATTGCCTCAGTTCTAATGTTATCCCTCTAA 669 0.4559 MASFVLGSNKTVHALGWFCLLLMVHKSAAYEFVVGGQKGWSVPSDPNFNPFNQWAEKSRFQVGDSLVFNYQSGQDSVLYVKSEDYASCNTGSAYAKYSDGHTVFKLNKSGPYFFISGNKDKCNKNEKLAVIVLADRSNSNSSNTNQTTTASPPSPQSSSSSPPSPAPSKQEGQSPPPADTNTTPSPASDHDHPSPPNGAASLFISLGGSAATFIASVLMLSL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3836 222 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Lja3g3836 222 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 222 - -
Lja3g3836 222 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Lja3g3836 222 MobiDBLite consensus disorder prediction 156 172 - -
Lja3g3836 222 CDD OsENODL1_like 30 133 IPR041846 -
Lja3g3836 222 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Lja3g3836 222 MobiDBLite consensus disorder prediction 137 155 - -
Lja3g3836 222 Gene3D - 30 147 IPR008972 -
Lja3g3836 222 MobiDBLite consensus disorder prediction 137 200 - -
Lja3g3836 222 MobiDBLite consensus disorder prediction 173 188 - -
Lja3g3836 222 PANTHER BLUE COPPER PROTEIN 5 222 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3836 Lja-Chr3 75507779 75509091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3836 14 188 Phytocyanin Superfamily AT3G20570 50.857 1.93e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3836 - - gmx:100792916 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3836 3 75507779 75509091 Lja3g3836 3 75507779 75509091 ECH