Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3833 ATGTCTGAATTAGACGCTCAGATTCCTACTGCCTTCGATCCTTTTGCTGAGGCAAATGTTGACGAGTCGGGTGCTGGGGGTGCTGGGACAAAGGACTATGTGCATATCCGCGTGCAGCAGAGGAATGGCAGGAAAAGCCTGACAACTGTTCAGGGATTGAAGAAAGAATTCAGCTATAACAAGATACTGAAGGACCTTAAGAAAGAGTTCTGTTGCAATGGTACAGTTGTTCAGGACCCAGAACTTGGACAGGTTATCCAACTTCAAGGTGATCAGCGGAAGAATGTTTCTACCTTCCTAGTCCAGGCTGGTATCGTGAAGAAGGATAATATCAAGATTCATGGTTTCTGA 351 0.4558 MSELDAQIPTAFDPFAEANVDESGAGGAGTKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3833 116 CDD eIF1_SUI1 32 115 IPR005874 GO:0003743
Lja3g3833 116 Pfam Translation initiation factor SUI1 31 105 IPR001950 GO:0003743|GO:0006413
Lja3g3833 116 PIRSF Transl_init_SUI1_Euk 1 116 IPR005874 GO:0003743
Lja3g3833 116 ProSiteProfiles Translation initiation factor SUI1 family profile. 34 104 IPR001950 GO:0003743|GO:0006413
Lja3g3833 116 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 116 - -
Lja3g3833 116 SUPERFAMILY eIF1-like 4 116 IPR036877 GO:0003743|GO:0006413
Lja3g3833 116 Gene3D - 2 116 - -
Lja3g3833 116 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 116 IPR005874 GO:0003743
Lja3g3833 116 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG ISOFORM X1 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3833 Lja-Chr3 75485108 75487788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3833 1 116 Eukaryotic Initiation Factors Gene Family AT5G54760 88.793 7.86e-74 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3833 3 75485108 75487788 Lja3g3833 3 75485108 75487788 ECH