Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3810 ATGTACAAGGGGAGATTGGGAGGCAAAGCTCAGCTTATTGGATATGTTGAAACGGATCCATCTGGTCGATATGGACGTTTCAGGGATATTTTAGGCAAAGGAGCCATGAAGGTAGTGTATAGGGCATTTGATGAGGTACTTGGAATAGAAGTGGCTTGGAACCAAGTTAAGCTTGGTGATGCCTTCAATTCACCTGACAAACTTCATCGCCTGTATTCAGAGAATCATCTCCTCAAGAACTTGGACCATGACTCTATCATCACCTTCCATAATTCTTGGATTGATGTCCATTGTAGAACTTTCAACTTCATCACTGAGCTGTTCACCTCTGGCACCCTACGAGAGTATAGAAAGAAGTACCCTCAAGTAGATATCAGAGCACTGAAGAACTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTGCACAGCCATGATCCTCCAGTGATACACAGAGACCTCAAGTGTGACAACATCTTCGTAAATGGCCATCTGGGGCAGGTCAAGATCGGTGACTTAGGCCTTGCAGCCATTCTTAGTGGCTCCCAACAAGCCCATAGTGTCATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAAGAGTACAATGAATTGGTAGACATATACTCCTTTGGGATGTGCATGATAGAGTTGTTCACTTTGGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTTCTGGGAAGCTGCCAGATGCATTTTACAGAATTAATGATTTGGAAGCTCAAAGGTTTGTGGGAAAGTGTTTGACAAATGTCTCTGAGAGGTTGTCAGCAAAGGAGCTCATGTTGGACCCGTTTTTAGCCATGGACCAACTTAGCTCACCATTGCCAAGCCCAACATTACCTAAAAAACATGCTAGCCTGCTCAATTTCAATGCAGAAGTTTCCAAAGAGCAACCTTCAATGTGTGACCAAACAAAGACCACACACATGACCATCACAGGGACAATAAATGAAGAGGATAATACAGTTTTCCTTAAAGTACAAATTTCTAACAAAACTGGGAATACAAGAAATATATACTTTCCCTTTGATATGATAAATGACACTGCTATTGAGGTGGCAATGGAGATGGTTAAGGAACTGGAAATTAGTGACTTGGAACCAGTAGAGATTGCTGAAATGATTGAGGAGGAGATATCAACATTAGTTCCAACGTGGAGAGATTTTGGTACTTCTAAGTATCAGCGACAACACAGTTTTAACTATGAAGAAGATGATGGTATCAGTAACCACCATCGTTTCTTCTCATTATCTTCTCGCTCTTCCTCTCACGGTTCTCTCCCAATGTTTGATTCTTCCTACAAGAACATCCACCTTTATCAGAACCATAACACTTTTGCTCAAGATTGGAATCAAGATGATCTATCTATGAATGATGATGAAAGCTCTCAGAGCTCAATGAACTCCTTGAGGTGTTTCGATATCCACTGCTGCGACTCAGGGAATGAACATGAGCATGGTGCAACTTTTGCAGTAGGAGCAGAACTACTTTGCAGTACGCCAAAGGCCAACAACAAGTGCACAAGATTCTGTCCTCGAGAAGAGGTGATGGAGGTTGATATCACTAAACAGTTTTGCAACATGAGAATGGATTCTCACTCTCATAGATATCATGGACCGGGACATGGATGTCGAAGGTTGAAAAGGATACACTCGTATGTTGATGTGAGGAGACCACAACTGCAAAGATCACTGATGGAGGAGATGCACAAGAGGAGGGTGATCAAGACGGTTGGAGCTGTTGAGAACTTTGGGTTTCAGGATCCAGAAGAAGGTGGATGTTTTTCTTGTTGA 1845 0.4249 MYKGRLGGKAQLIGYVETDPSGRYGRFRDILGKGAMKVVYRAFDEVLGIEVAWNQVKLGDAFNSPDKLHRLYSENHLLKNLDHDSIITFHNSWIDVHCRTFNFITELFTSGTLREYRKKYPQVDIRALKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILSGSQQAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIELFTLEFPYSECSNPAQIYKKVTSGKLPDAFYRINDLEAQRFVGKCLTNVSERLSAKELMLDPFLAMDQLSSPLPSPTLPKKHASLLNFNAEVSKEQPSMCDQTKTTHMTITGTINEEDNTVFLKVQISNKTGNTRNIYFPFDMINDTAIEVAMEMVKELEISDLEPVEIAEMIEEEISTLVPTWRDFGTSKYQRQHSFNYEEDDGISNHHRFFSLSSRSSSHGSLPMFDSSYKNIHLYQNHNTFAQDWNQDDLSMNDDESSQSSMNSLRCFDIHCCDSGNEHEHGATFAVGAELLCSTPKANNKCTRFCPREEVMEVDITKQFCNMRMDSHSHRYHGPGHGCRRLKRIHSYVDVRRPQLQRSLMEEMHKRRVIKTVGAVENFGFQDPEEGGCFSC* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3810 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 607 - -
Lja3g3810 614 SUPERFAMILY Protein kinase-like (PK-like) 27 284 IPR011009 -
Lja3g3810 614 Gene3D - 340 404 - -
Lja3g3810 614 PANTHER WNK KINASE 1 607 - -
Lja3g3810 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Lja3g3810 614 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3810 614 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3810 614 Gene3D Phosphorylase Kinase; domain 1 13 106 - -
Lja3g3810 614 Gene3D Transferase(Phosphotransferase) domain 1 108 289 - -
Lja3g3810 614 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3810 Lja-Chr3 75091665 75098712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3810 13 423 MAP Kinase Kinase Kinase AT3G51630 69.660 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lja3g3810 Pkinase 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3810 K08867 - gmx:100816187 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3269 1 40407790 40412841 Lja3g3810 3 75091665 75098712 PCT