Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3809 ATGGGGAATTACAGGTTCAAGTTATCAGACATGATTCCCAATGCCTGGTTTTACAAGCTGAAAGACATGGGGAGAGGGAACAAGCAAACACACACTCTTTCCAGAAACAAGAAACAATCCTTACCATCCTCAACCACACAATCATCAAAACCAAAACAAACCCACCATTCCAATCCCAGAAGGTCTTACTATTTCACAAGAGAGGTTAACCCTTACCCAACCACCTACAAACCCAACAATTCCCCTGAACCTGAACCTGAACCACCCAGAAAATCATCCAAACAGAGAACCAGAAGAAGAAGAAGAAGAACAGCTTCTTCTGCTACCCCAAAGCTTGTTACCTCAGCAGGTTGTAACTGCCGCCCCACCATCGAATCTGTTTGGATCAAATCGAATTCCCCACCAGGACACTCTTCATCTCATTCACCATTTGATGATAGCTCTGCTGAAACAGAGTCCCCTGACCCAGAATTCAGAACAGACCGTGTTCTTCTTCCCTCTGAGTCATCATCATTTGATGAAATGGTTTCCTTATCCACCTCCTGTGCCTGCACCAGAGACATCGTTATCGATGTTGAAGGGAATTCTCTTGCCAGAAAAGATGACAAGCTTGAAGGCTGTGACGATGATGATGATGATGATGATGTTGATGCATTTTCAGAGCTTGTAGAACTTCCTCCAATCATAACCAAAACACCCAAAATCAACAACTTTGTGAGCGATTGCAGGAAGAAAGAACCAAAATCCAGAAGCAGAATCGCCAAAACAAACGAACAAGGGTATCTGAAGGTTCGAATTGTGAAGGAAGATTCAACTGCAGCATCAGTGAAAGGACAGAGAAGCACTGGCTCTGTTTTTCGGAGATTCTCCTCTGCTTCTCACATGGCAAATTCTCCGGGAGTGAAACTCCGGGTCAACTCGCCGAGAATTGCTAGCTTAAAGGTCCACAACTACTCTCATGGCAGGTCGTCGACGACTGGCTCCCGGAGAAGCTTCTCCGGCAGCTGCGCCGTCGTGAAGTCGTCGTTCAACCCGCAGAAGGATTTCAGGGAGTCAATGGTGGAGATGATCGTGCAGAACAACATCAGGGCGTCGAAGGACTTGGAAGATCTTCTTGCTTGTTACCTTTCTCTGAATTCAGACCAGTATCATGAACTCATCATCAAGGTGTTCAAGCAAATTTGGTTTGATTTGACAAGGTAG 1203 0.4555 MGNYRFKLSDMIPNAWFYKLKDMGRGNKQTHTLSRNKKQSLPSSTTQSSKPKQTHHSNPRRSYYFTREVNPYPTTYKPNNSPEPEPEPPRKSSKQRTRRRRRRTASSATPKLVTSAGCNCRPTIESVWIKSNSPPGHSSSHSPFDDSSAETESPDPEFRTDRVLLPSESSSFDEMVSLSTSCACTRDIVIDVEGNSLARKDDKLEGCDDDDDDDDVDAFSELVELPPIITKTPKINNFVSDCRKKEPKSRSRIAKTNEQGYLKVRIVKEDSTAASVKGQRSTGSVFRRFSSASHMANSPGVKLRVNSPRIASLKVHNYSHGRSSTTGSRRSFSGSCAVVKSSFNPQKDFRESMVEMIVQNNIRASKDLEDLLACYLSLNSDQYHELIIKVFKQIWFDLTR* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3809 400 MobiDBLite consensus disorder prediction 129 149 - -
Lja3g3809 400 Pfam DNA-binding domain 1 53 IPR025830 GO:0003677
Lja3g3809 400 Pfam Transcriptional repressor, ovate 342 398 IPR006458 -
Lja3g3809 400 MobiDBLite consensus disorder prediction 27 117 - -
Lja3g3809 400 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 399 - -
Lja3g3809 400 ProSiteProfiles OVATE domain profile. 338 397 IPR006458 -
Lja3g3809 400 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 399 IPR038933 GO:0045892
Lja3g3809 400 MobiDBLite consensus disorder prediction 129 161 - -
Lja3g3809 400 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 337 399 IPR006458 -
Lja3g3809 400 MobiDBLite consensus disorder prediction 27 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3809 Lja-Chr3 75046253 75047761 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lja3g3809 Ovate 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3809 - - aprc:113863721 352.058