Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3798 ATGGAGCTTAAGAACAATATATGGTTCTTCTTGTTTCTCTTTAGTCTTTTCTCTGGCTCTCAAGCCTACACATTCTATGTTGGTGGAAAAGATGGATGGGTTTTGAACCCTTCGGAGAACTACAATCAATGGGCTGGAAGGAACAGGTTCCAAGTCAATGACAATCTTGTTTTCAAGTACAAAACTGGCTCAGACTCTGTGTTAGTGGTGAACAAGGAGGATTATGACAAATGCAACAAGAAGAACCCGATCAAGAAGCTTGAGGATGGTGAATCTCAGTTCCAATTTGATCGATCGGGTCCTTTTTACTTCATCAGCGGCAAAGACGAAAATTGTGAAAAGGGTCAGAAACTGATCATTGTGGTGTTGGCAGAGGAACAACATCATAATCCTTATCCACCTCATTTGCCATATGTTCCAATTCCTCCCAAAGCTCCTTATGTTCCGACACCTCCACATTCTCCTGCTCCTCCCTATGTTGTTCCTTCACCTCCAAACGTTCCAACTCCTCCACAAACTCCTTCCCCTGTTTATAGTCCTCCAAATGTTCCTTCACCTCCACAAACTCCTCATGCTCCCTATGTTCCAACCCCTCCAAAAACACCTTCTCCAACTTACAGTCCTCCAAATGTTCCTTCACCTCCACAAACTCCTCATGCTCCCTATGTTCCAACCCCTCCAACTTACAGTCCTCCAAATGTTCCTTCACCTCCACAAACTCCCCATACTCCCTATGTTCCAATCCCTCCAAAAACACCTTCTCCAACTTACAGTCCTCCAAATGTTCCTTCACCTCCAAAAACTCCTCATCCTCCATATGTTCCAACTCCTCCACAAAGTCCTTCCCCTGTTTATAGTCCTCCAAATGTTCCTTCACCTCCACAAACTCCCCATACTCCCTATGTTCCAATCCCTCCAAAAACACCTTCTCCTGTTTATAGTCCACCAAATGTTCCTTCACCTCCACAAACTCCTCATGCTCCTTACGTTCCAACCCCTCCAAAAACACCTTCTCCTGTTTATAGTCCTCCAAATGTTCCTTCACCTCCACAAACTCCTCATGCTCCCTACGTTCCAACCCCTCCAAAAACACCTTCTCCTGTTTATAGTCCTCCAAATGTACCTACTCCTCCAAAAAATCCTTCACCTATTCATTCTCCACCTTATGTCCCAACTCCTCCAAAAACACCTTCTCCTGTTTATAGTCCTCCAAATGTACCAAGTCCTCCAAAAACTCCTTCACCTAGTCATAATCCACCCTATGTTCCAACCCCTCCAAAAACCCCTTCTCCTAGCTACAGTCCTCCTAATGTACCAAATCCACCAAAAGCTCCTTCCCCTCGCAGTTACCCTCCACATACACCAATTCCTCCAAAAACTCCCTCTCCTATCTCTCAACCTCCTTATGTTCCAACACCACCAAAAACTCCTTCACCTGTTTATAGTCCTCCCAGTATTCCTACTCCTCCAAAAACTCCTTCCCCTGGCAATCAACCTCCACATACACCAATTCCTCCCAAAACCCCTTCTCCTAGCTATAGTCCTCCTAATGTTCCTTCTCCTCCGAAAGCTCCTTCCCCAAACAATCATCCTCCATATACCCCAACACCTCCAAAAACTCCTTCCCCAACATCTCAACCACCTTACATTCCATTACCTCCTAAAACCCCTTCTCCAATTTCTCAACCTCCACATCCACCTTACACTCCTGCACCTATAAAACCCCCTTCTCCTACTTCCCAACCTCCATACATCGCTACACCTCCAAACACACATTCCCCAACATCTCAACCACCCAACACTCAAACACCTGCAAACACTCCTTCTCCATCTTCTCAGCCACCCTATCTCTCAACTCCACCAAAATCCAATTCCCCAACCTCTCAACCCCCAGTAGCACAAACACCTAGAGCTGTAACACCAATTTCATCGCCATCATCTTCACCAACATCAAATTCTCCGTATCCATCCACCAACCCACCATCTCTGGCACCTTCTATTTCAACTTCACCTCCGGCCCTCACTCCGGCAAGCACTCCGGTTCCGGCCACAGCATCCCCACCATCACAGTCCCCATCGGCAGAATCCCCTGGGGCGTCCCTTCCGGCAGCGACAACTCCATCACCGTCGTCCACAACACCGAGGTCGACCCAAACACCGTCGTCGAACAACGAAACGACACCAGCTCAGCGAAATGGCGCGTCCTCTGCAACTCCATCAGGGTTATGGTTTTATGCCTTTACAATTTTTGTTACTGTCACTCTCACTACGATTGTTGGGTAG 2283 0.4704 MELKNNIWFFLFLFSLFSGSQAYTFYVGGKDGWVLNPSENYNQWAGRNRFQVNDNLVFKYKTGSDSVLVVNKEDYDKCNKKNPIKKLEDGESQFQFDRSGPFYFISGKDENCEKGQKLIIVVLAEEQHHNPYPPHLPYVPIPPKAPYVPTPPHSPAPPYVVPSPPNVPTPPQTPSPVYSPPNVPSPPQTPHAPYVPTPPKTPSPTYSPPNVPSPPQTPHAPYVPTPPTYSPPNVPSPPQTPHTPYVPIPPKTPSPTYSPPNVPSPPKTPHPPYVPTPPQSPSPVYSPPNVPSPPQTPHTPYVPIPPKTPSPVYSPPNVPSPPQTPHAPYVPTPPKTPSPVYSPPNVPSPPQTPHAPYVPTPPKTPSPVYSPPNVPTPPKNPSPIHSPPYVPTPPKTPSPVYSPPNVPSPPKTPSPSHNPPYVPTPPKTPSPSYSPPNVPNPPKAPSPRSYPPHTPIPPKTPSPISQPPYVPTPPKTPSPVYSPPSIPTPPKTPSPGNQPPHTPIPPKTPSPSYSPPNVPSPPKAPSPNNHPPYTPTPPKTPSPTSQPPYIPLPPKTPSPISQPPHPPYTPAPIKPPSPTSQPPYIATPPNTHSPTSQPPNTQTPANTPSPSSQPPYLSTPPKSNSPTSQPPVAQTPRAVTPISSPSSSPTSNSPYPSTNPPSLAPSISTSPPALTPASTPVPATASPPSQSPSAESPGASLPAATTPSPSSTTPRSTQTPSSNNETTPAQRNGASSATPSGLWFYAFTIFVTVTLTTIVG* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3798 760 CDD OsENODL1_like 23 123 IPR041846 -
Lja3g3798 760 PANTHER EARLY NODULIN-LIKE PROTEIN 2 11 304 - -
Lja3g3798 760 MobiDBLite consensus disorder prediction 628 653 - -
Lja3g3798 760 MobiDBLite consensus disorder prediction 688 738 - -
Lja3g3798 760 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Lja3g3798 760 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Lja3g3798 760 PANTHER BLUE COPPER PROTEIN 11 304 IPR039391 GO:0009055
Lja3g3798 760 Gene3D - 21 128 IPR008972 -
Lja3g3798 760 MobiDBLite consensus disorder prediction 163 627 - -
Lja3g3798 760 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Lja3g3798 760 MobiDBLite consensus disorder prediction 163 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3798 Lja-Chr3 74839925 74842784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3798 3 124 Phytocyanin Superfamily AT5G53870 59.200 1.18e-51 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3798 - - ccaj:109806081 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3798 3 74839925 74842784 Lja3g3798 3 74839925 74842784 ECH