Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3787 ATGGCACAGTTACCTCCTAAAATACCAACCATACCCCAAAATTGGCCTTCTTTTCCTCACCATAGGGGATTAATGTCGAACTTCACCACCACCGCCGCCACCACCACCACCACCCCTCCAAGTCAACACCAATCACCACCAACATCCTCACAACAATTACCATCATGGGTTGACGAGTTTCTTGACTTCTCCTCAACGCGGCGGGGGTCTCACCGGCGCTCCGTCAGCGACTCCATTGCCTTCCTGGAGACACCGTTCCTTGACGAATGCCAAGATGGCAGCGGCGGCGGCAGCGATGAGTTCAATAGGATGGACGATGAGCAGCTCATTTCCATGTTCTCCGATGACATCTCCGGCGTTGTTCTTCCGCCTCCGCCGCTTTCTTCCGCGTCCAACCCCTCCTCGCCGTCGTCTGACCAGAACAGCAACAACGATGAAAAGGCAATGGCGTTGGACGCTGTTCCTGTTCACCCCAAGAGCGAAGCCGTTGATGATGAAACGTCGTTTAAGAATGAGGCGGCGCAACCTCCCTTCGCCACCACTGAAACCGTCGTCGATCCCAAGAGGGTTAAAAGGATTTTGGCTAACCGGCAATCAGCTCAGAGGTCAAGGGTGAGAAAGCTACAGTACATTTCTGAGCTTGAAAGGAGCGTAACCACTTTGCAGACGGAGGTTTCAGCATTGTCACCACGAGTTGCATTCTTGGACCATCAACGTTTGATTCTTAATGTCGACAACAGTACCTTGAAGCAACGGATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGATGCATTAAAGAAGGAAATTGAAAGACTGAGGCATATCTATCACCAACAGAGTCTTCAAAAGATGGGAAACAACAACAACAGCAACAACAATGGCCATTCTCTTCAATCCCCACCAGCATCACAGCAACATCCACAACACTCTCTTCACCAGCAACTAACAGCTTCTCCACCTTTGGCATACAAGGACAATGAGCAGCTTCTCAGCTAA 1011 0.5035 MAQLPPKIPTIPQNWPSFPHHRGLMSNFTTTAATTTTTPPSQHQSPPTSSQQLPSWVDEFLDFSSTRRGSHRRSVSDSIAFLETPFLDECQDGSGGGSDEFNRMDDEQLISMFSDDISGVVLPPPPLSSASNPSSPSSDQNSNNDEKAMALDAVPVHPKSEAVDDETSFKNEAAQPPFATTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSTLKQRIAALAQDKIFKDAHQDALKKEIERLRHIYHQQSLQKMGNNNNSNNNGHSLQSPPASQQHPQHSLHQQLTASPPLAYKDNEQLLS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3787 336 MobiDBLite consensus disorder prediction 117 144 - -
Lja3g3787 336 MobiDBLite consensus disorder prediction 23 54 - -
Lja3g3787 336 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Lja3g3787 336 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Lja3g3787 336 PANTHER BASIC LEUCINE ZIPPER 34 1 302 - -
Lja3g3787 336 Gene3D - 187 285 - -
Lja3g3787 336 PANTHER BASIC LEUCINE ZIPPER 2 1 302 - -
Lja3g3787 336 SUPERFAMILY Leucine zipper domain 188 242 IPR046347 GO:0003700|GO:0006355
Lja3g3787 336 CDD bZIP_plant_RF2 189 239 IPR044759 GO:0003700|GO:0006355
Lja3g3787 336 MobiDBLite consensus disorder prediction 288 326 - -
Lja3g3787 336 MobiDBLite consensus disorder prediction 159 181 - -
Lja3g3787 336 MobiDBLite consensus disorder prediction 1 54 - -
Lja3g3787 336 Pfam bZIP transcription factor 188 233 IPR004827 GO:0003700|GO:0006355
Lja3g3787 336 MobiDBLite consensus disorder prediction 288 336 - -
Lja3g3787 336 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 238 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3787 Lja-Chr3 74608890 74612910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3787 1 266 bZIP Transcription Factor Family AT3G58120 50.987 1.14e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g3787 bZIP_1 2.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3787 - - lja:Lj0g3v0133049.1 574.318