Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3784 ATGAAGAAACCAAAGCAAACCCAGTTCAGTCCCAACTGGGCTCAACTCCAACAAAAGCTGAACCTGAATAATAATGGCTCCAAGACCAAAAATTCAGAAGAAGATACCTTAAAATCGATACTTGGGAAACGTAAAGAGAGGCCAGATGATGAATCCAATGATTCTCAGATTAATCCTCTTATTCCTGTCAATGATGATGCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAGATGGTGGGCGTTGGTTCCGGGAACAAAAGTGCCCTTGGAAGAGTAACATTGGTTAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTAAAGCCAATTGAGCGGGTTGTTGATTTCCGCACTAAAATTAGTGGCCTAAGACCTCGGGATCTGAGAAAAGGAAAGGATTTTTGGACTGTTCAGAAGAAAGTGGCGGAGTTGATCAAGGGAAGGATCCTTGTTGGTCATGCCTTGTCCAATGACTTTAAGGCATTATTATTAAGTCACCCCAAAAAGGATATACGAGATACCTCTGAGTACCAACCATTTCTAAACTCAAATAGTAGAATAGCATTACGGCACCTCGCTGCGGAACGTCTTGGTGTGAAGATCCAAACAGGAGAGCACTGCCCGATACAAGATGCCCGTGCTGCTATGCTGCTTTACCAAAGAAATAGAAAAGAATGGGAGAAGAGCATAAAAGATCAATCTCGGATCAAACAGAAGCAAATGAAACGGAAGCAGAAAAAGAAGCATAAGAATGAAAATGCTTCAGATTCCAACCACTCTGGAATTGAATTGTAG 798 0.4185 MKKPKQTQFSPNWAQLQQKLNLNNNGSKTKNSEEDTLKSILGKRKERPDDESNDSQINPLIPVNDDASLTDAVAMDCEMVGVGSGNKSALGRVTLVNKWGNVIYDEFVKPIERVVDFRTKISGLRPRDLRKGKDFWTVQKKVAELIKGRILVGHALSNDFKALLLSHPKKDIRDTSEYQPFLNSNSRIALRHLAAERLGVKIQTGEHCPIQDARAAMLLYQRNRKEWEKSIKDQSRIKQKQMKRKQKKKHKNENASDSNHSGIEL* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3784 265 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 21 249 - -
Lja3g3784 265 PANTHER RNA EXONUCLEASE 4 21 249 - -
Lja3g3784 265 Coils Coil 210 230 - -
Lja3g3784 265 MobiDBLite consensus disorder prediction 1 30 - -
Lja3g3784 265 SUPERFAMILY Ribonuclease H-like 72 221 IPR012337 -
Lja3g3784 265 Gene3D - 67 250 IPR036397 GO:0003676
Lja3g3784 265 CDD REX4_like 73 221 IPR037431 GO:0006364|GO:0008408
Lja3g3784 265 MobiDBLite consensus disorder prediction 228 265 - -
Lja3g3784 265 Pfam Exonuclease 73 220 IPR013520 -
Lja3g3784 265 MobiDBLite consensus disorder prediction 31 53 - -
Lja3g3784 265 SMART exoiiiendus 71 229 IPR013520 -
Lja3g3784 265 MobiDBLite consensus disorder prediction 1 61 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3784 72 224 C2H2 Transcription Factor Family AT2G48100 37.423 1.87e-27 106