Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3770 ATGGTGGGCTCAGGATCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTTAACTCAGACTGGACTTATTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGAGTTAGAGGCGGTAATGGCTGCAAGGTTGGAGATGACAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGGTCTGGATGATATTGATGGAGAGGATCCTGTCAGAAAAGTTTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACAGACCAGTTTGAGTCAGGCATTCAGACCATAGCTGTAATTCAAGCCGGACATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTCGTCCTAAGAATGAGACACACTTTTGAATCTCTAGGTTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACAAGGAACTCTTCTTCTTCAACTTCAATACCTTCGAAACTATCCACCATTCCGATTCGGCCACCTCCTCCACTCTTCAACTGGGGTCAGAGGCCACTCAATCCTGCTACTTCTCTGCTATCGTCGCCCAATTTTCAGCAACACGCAGCGAGGCTCAGGTTTCCACAGGCCAAAGATGAGACACACTTGTTTCTCATGCCTCACGCATCATCTGAAACTGCGCGAATTGAAGACATGATGGGGGAGCACGAAAATGACATAAAATGGCCTAATGGCTTGTCTTTCTTCAATGCTCTCACTGGAAGAACCGATGATGCTAAGCTTTTGTTCAATCCAGAGAGCTTGGGGAGCAAACTTGGTGACCAGAATCACAATCACCACCATTCTCTTGATCAGCATCCCAATTCCTCCAACATGATGCAAAATTCTGGTGAAGCCAACCCTAACGACTTCTTGAGCTTGGATAGCCACTCAGAAGGTGCAAGAAAGATGGATAAGTTTAAGAGGAGCTTCACTTTGCCTGCAAGAGTGGCTTCATCATCTTCATCCACTTCAATGGAGCACCATCACCATCATCAACAGCAAGGTGTGGAGTATAGGAATTCAGAAGGAGGAATGTACCCGGATGTCATGGAGACCTTTTTGGAGTGA 1260 0.4659 MVGSGSGASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRGLDDIDGEDPVRKVFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNSSSSTSIPSKLSTIPIRPPPPLFNWGQRPLNPATSLLSSPNFQQHAARLRFPQAKDETHLFLMPHASSETARIEDMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPESLGSKLGDQNHNHHHSLDQHPNSSNMMQNSGEANPNDFLSLDSHSEGARKMDKFKRSFTLPARVASSSSSTSMEHHHHHQQQGVEYRNSEGGMYPDVMETFLE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3770 419 MobiDBLite consensus disorder prediction 335 357 - -
Lja3g3770 419 PANTHER GB|AAF34833.1 1 419 - -
Lja3g3770 419 MobiDBLite consensus disorder prediction 319 359 - -
Lja3g3770 419 MobiDBLite consensus disorder prediction 378 408 - -
Lja3g3770 419 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 89 186 IPR025610 -
Lja3g3770 419 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 21 75 IPR025610 -
Lja3g3770 419 PANTHER GB|AAF34833.1 1 419 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3770 Lja-Chr3 74353275 74356181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3770 22 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 33.136 1.62e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3770 - - gmx:100814723 716.842