Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3769 ATGGCAGCCAGAGATATCCTTCTTAAGATGAAGGAAAAAGTTGGGTTGAGTTCTTCAGCCCCTGATTCAGGGAAAGGAAAGAGCAAGTTGTCGAAGCACGTAACTCACGGTTTTCACCTGGTAAAGGGGAGATCATATCATGAGATGGAGGACTTTGTTGTTGCTGAGTTTAAGCAAGTTGAAAGCAATGAGTTGGGTTTGTTTGCAATATTTGACGGCCATGCGGGTCACAATGTACCTAACTACCTCCGGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGACTTCTGGAAAGAACCTGCAAAGGCTATCAGGACAGCATATAGTATAACTGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCAGTTACGGCAGTATTGATCAATTGTCAGAAGTTAGTAGTAGCCAATGTTGGCGATTCTCGGGCTGTCTTGTGCAAGAAAGGCGTGGCAAAACAGCTATCAGTGGATCATGAGCCAAGCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCCAAATTTCCAGGGGACGTTCCGCGGGTTGATGGAAGGTTGGCGGTATCAAGGGCATTTGGGGACAAAAGCTTGAAGAAACACTTGAGTTCAGATCCAGATGTGACAACGGAGCTGATAAATGATGATGCAGAGTTTGTTATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATTCTATCAAAGACATAAAGGATGCTCGGTTATCCGCAAAGCGTCTTACTGAAGAAGCAGTTAACAGGAAAAGCAAAGATGATATCTCCTGCATTGTTGTGAAGTTTCAATGA 852 0.4225 MAARDILLKMKEKVGLSSSAPDSGKGKSKLSKHVTHGFHLVKGRSYHEMEDFVVAEFKQVESNELGLFAIFDGHAGHNVPNYLRSHLFDNILKEPDFWKEPAKAIRTAYSITDSTILEKSGELGRGGSTAVTAVLINCQKLVVANVGDSRAVLCKKGVAKQLSVDHEPSTEHEDIKNRGGFVSKFPGDVPRVDGRLAVSRAFGDKSLKKHLSSDPDVTTELINDDAEFVILASDGLWKVMSNQEAVDSIKDIKDARLSAKRLTEEAVNRKSKDDISCIVVKFQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3769 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Lja3g3769 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Lja3g3769 283 CDD PP2Cc 42 282 IPR001932 -
Lja3g3769 283 SMART PP2C_SIG_2 48 282 IPR001932 -
Lja3g3769 283 Gene3D - 30 283 IPR036457 -
Lja3g3769 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Lja3g3769 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Lja3g3769 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Lja3g3769 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Lja3g3769 283 SMART PP2C_4 33 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3769 Lja-Chr3 74340362 74343515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3769 1 283 PP2C-type Phosphatase Gene Family AT3G15260 74.048 8.21e-159 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3769 K17506 - gmx:100500617 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3769 3 74340362 74343515 Lja3g3769 3 74340362 74343515 ECH