Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3765 ATGATTAACAATGGAGTATGCAGCCTCCGCACATGCCTCCGTCTCCCGGAGAGACCCCTATTCCGAGCATCTCCGCTCTCATTCAGTCGGCGGCTGCGGTTTATCGCCACCGCAGCCGAAACGAAGAAGAAAGAGAAGGTGATAGTCATTTCTGGACCTACCGGTTCCGGCAAGAGCCGCCTCGCAATGGAGCTCGCAAAGCGCCTCAATGGCGAAATCGTCAGTGCCGACTCTGTCCAGGTTTATCAGGGTCTTGATATTGGATCTGCGAAGCCTTCCTTAGATGATAGAAAGGAGGTACCGCATCATCTTGTTGATATACTGCACCCATCTGAAGACTATTCTGTTGGGCAGTTTTTTGAAGATGCAAGGCAAGCTACAAAATGTATTTTTGACAAAGGCCGTGTTCCCATAGTTGTTGGGGGCACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTGCCTAAAGCCTCTGCAGAGGTTTCATCTCAAGTACATCTGGAATTAGCCAAACTGCAGAGAAATGAAGACTGGGATGCTGCTGTGCAGTTGGTGGTAAAAGCAGGTGATCCAAAGGCCCAATTTGTGGCATCGAATGATTGGTACCGATTACGTCGTAGCCTAGAGATTATTAGGTCTAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGAATCTTTCACGGAACAGGATGGTTGTAGTGTTGCTGATGGTTCTGAGCCGTCTCATATGACCACTTATGGTGATGCAATGGAAACCGACTCATCAAAGTTAGACTACGACTTTTTGTGTTTTTTCCTTTCTAGCAACAGACTTGACCTCTATAAGTCACTTGATTATCGGTGTGAAGATATGCTATTAGGAAGGCATGGGATTTTGTCGGAGGCTCAGTGGCTTCTTGATATTGGTCTTCATCCAAACTCCAATTCTGCAACTCGAGCAATTGGTTACAGACAGGGCATGGAGTACTTGCTAACATGCAGAGAGCAAAGGGGTCAGAGTTCAGCTCGAGAATTTTACAAATTCTTGGCTGAATTTCAAAAAGCTTCACGGAATTTTGCAAAAAGACAGTTGACATGGTTTCGCAATGAACGTATATACCACTGGCTTGATGCTTCTAAACCTCTGGAAACCGTTCTTAACTTCATTCACGATGCATACAATTATGGAAATGGAAGTCTTCTTGTGCCTGAACACCTAAGCATGCCGAGAGATATTTCAGATCGCCGGGTAGCTGCTAAACTTAAGTCTTACCGCTCCAAAAATAGGCATTTTGTGAACGGGGAAGATTGTTCTCATATACTCAACTGGATAAGAGAGACTCAAAGGTGA 1344 0.4516 MINNGVCSLRTCLRLPERPLFRASPLSFSRRLRFIATAAETKKKEKVIVISGPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPSEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGKPDVPKASAEVSSQVHLELAKLQRNEDWDAAVQLVVKAGDPKAQFVASNDWYRLRRSLEIIRSSGSPPSAFRVPYESFTEQDGCSVADGSEPSHMTTYGDAMETDSSKLDYDFLCFFLSSNRLDLYKSLDYRCEDMLLGRHGILSEAQWLLDIGLHPNSNSATRAIGYRQGMEYLLTCREQRGQSSAREFYKFLAEFQKASRNFAKRQLTWFRNERIYHWLDASKPLETVLNFIHDAYNYGNGSLLVPEHLSMPRDISDRRVAAKLKSYRSKNRHFVNGEDCSHILNWIRETQR* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3765 447 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 37 446 IPR039657 -
Lja3g3765 447 Pfam IPP transferase 80 368 - -
Lja3g3765 447 Hamap tRNA dimethylallyltransferase [miaA]. 47 385 IPR018022 GO:0008033
Lja3g3765 447 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 37 446 - -
Lja3g3765 447 TIGRFAM miaA: tRNA dimethylallyltransferase 47 224 IPR018022 GO:0008033
Lja3g3765 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 175 IPR027417 -
Lja3g3765 447 Gene3D - 156 226 - -
Lja3g3765 447 Gene3D - 44 419 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3765 Lja-Chr3 74270963 74279283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3765 50 347 C2H2 Transcription Factor Family AT2G27760 26.059 3.78e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3765 K00791 - gmx:100808814 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3765 3 74270963 74279283 Lja3g3765 3 74270963 74279283 ECH