Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3763 ATGGGATCACCATTCAAGCCCATCTCATGCACCAGGAAAACCCCATACAGATTAGAAACCAAGAATTTATCATACCAATTGTGCAGCCAACTTGATGAATACAGAACTCTTTGCTTTGGTGCAAATCCTAGGAGAGTTGGAAAGTTCATTCTGAAGGATGTAAATTGTGAGGCAAGGCCGGGGGAGCTTACTGCTATTGCTGGTCCTAGTGGAGCTGGAAAAACCACACTGCTTGAAATTCTTGCTGGGAGAATACCCCCATCATCTAAAGTGTCAGGGCAAGTACTTGTCAATCACAGGCTTATGGATGTGAACAGATTCAGAAGAGCATCTGGGTATGTCACACAGGAAGATGCTTTGTTCCCATCACTTACTGTTCGAGAGACACTCATGTATAGCGCTTTGCTGAGGCTTCCCGGCGGAAGAAAAGTTGCTGTCACCAGAGTTACAGAGTTGATGAAGGAGCTTGGGTTGGACCACATTGCAGACTCAAGAATTGGTGGAGGATTGGAATCAGATCATGGCATATCCGGTGGCGAAAGGCGAAGAGTTTCCATTGGTGTAGACTTGGTTCATGACCCTGTAGTTATTTTGATTGATGAACCAACTTCAGGGCTGGATTCAGCATCAGCTCTTAATGTAGTCTCATTGCTGAGATTGATGGCATTTAATCAAGGCAAGACAATTGTTTTAACAATCCACCAACCTGGTTTTCGCATCTTAGAGCTATTTGACGGTCTCATTTTGCTGTCTGATGGATTCGTCATGCATAACGGGTCATTGAATCTTCTCGAGGCGAGGCTCAAGTTAGCAGGGCATCACATTCCGAACCATGTCAATGTCCTTGAATTCGCGCTTGATGTCATGGAAAGCTTGGTCATACATGCTACTTCAGAATCTGGGAACAACCAATTTCTTCTCAGTGACAGAGAGCGCATAGATCGCAAAATGAGGATGCAGTATGCTAAGATTGTCAAAGAAAAGGCTCTTTTGTACTCAAATTCTCCAATGGAGGAGATTTTAATCCTGGGACAGAGATTCTGCAGAAACATAGTCAGAACCAAGCAACTCTTTATTACCAGGGTCATACAAGCCTTAGTAGCAGGATTTGTAATGGGGACCATATTTTTGAATGTTGGCAGCAAACAAAGCCAACTAGCATTGCAAACACGAAGCGGTTTCTTTGCTTTCAGCCTTACCTTTTTGCTGTCATCAACAACAGAAGGCTTACCTATTTTCTTGGAGGAGAGAAGAACTTTCATGAGAGAGACCTCAGGAGAAGCTTATAGAGTTTCTTCCTATGTTCTAGCAAATACCCTTGTGTTCCTTCCTTTCCTTCTCATGGTTGGTCTTCTCTACACTACTCCAGTTTATTGGCTTGTAGGATTGAGAAAAGACATGGATGGTTTTCTTTACTTCTCTTTAGTGGTTTGGTTGGTCCTGCTCATGTCGAATTCTCTGGTGGCTTGTTTCAGCGCTCTAGTGCCGAATTTCATCCTCGGAAGCTCGGTGATTGCAGGTCTAATGGGGTCTTTCTTTCTGTTCTCAGGGTATTTCATATCAGAAGAAAAAATGCCCCGGTACTGGATTTTTATGCACTATTTGAGCCTGTTCAAGTATCCATTTGAGTGCCTTATGATAAATGAGTATGGAGGAGAGCAAGGGAAAACGAGATGCATTGAAATTAGCAATGGAGAATGCATATTACATGGAGCTGAGTTCTTAAGACAACAGGATCTGAATGAAACACAAAAATGGACCAACTTGGCTGTGATGGGAGGCTTTATAATGGGGTATCGTGTGCTTAACTTTTTCATTCTTTGGTTCAGATGCTACAGAACCAGAAAATAA 1851 0.429 MGSPFKPISCTRKTPYRLETKNLSYQLCSQLDEYRTLCFGANPRRVGKFILKDVNCEARPGELTAIAGPSGAGKTTLLEILAGRIPPSSKVSGQVLVNHRLMDVNRFRRASGYVTQEDALFPSLTVRETLMYSALLRLPGGRKVAVTRVTELMKELGLDHIADSRIGGGLESDHGISGGERRRVSIGVDLVHDPVVILIDEPTSGLDSASALNVVSLLRLMAFNQGKTIVLTIHQPGFRILELFDGLILLSDGFVMHNGSLNLLEARLKLAGHHIPNHVNVLEFALDVMESLVIHATSESGNNQFLLSDRERIDRKMRMQYAKIVKEKALLYSNSPMEEILILGQRFCRNIVRTKQLFITRVIQALVAGFVMGTIFLNVGSKQSQLALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTFMRETSGEAYRVSSYVLANTLVFLPFLLMVGLLYTTPVYWLVGLRKDMDGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGSSVIAGLMGSFFLFSGYFISEEKMPRYWIFMHYLSLFKYPFECLMINEYGGEQGKTRCIEISNGECILHGAEFLRQQDLNETQKWTNLAVMGGFIMGYRVLNFFILWFRCYRTRK* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3763 616 Pfam ABC transporter 51 204 IPR003439 GO:0005524
Lja3g3763 616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 277 IPR003439 GO:0005524
Lja3g3763 616 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 2 608 - -
Lja3g3763 616 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 608 - -
Lja3g3763 616 CDD ABCG_EPDR 43 259 - -
Lja3g3763 616 SMART AAA_5 60 254 IPR003593 -
Lja3g3763 616 Pfam ABC-2 type transporter 339 550 IPR013525 GO:0016020|GO:0140359
Lja3g3763 616 Pfam ABC-2 type transporter 234 302 IPR043926 GO:0140359
Lja3g3763 616 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524
Lja3g3763 616 Gene3D - 21 279 IPR027417 -
Lja3g3763 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 269 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3763 Lja-Chr3 74248366 74250501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3763 43 264 Calmodulin-binding Proteins AT2G36910 27.074 6.12e-12 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3763 3 74248366 74250501 Lja3g3763 3 74248366 74250501 ECH