Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3756 ATGACCACTACTACCACAACTTCACTCCCCTTCTCCCAATTCTACGACTTATGGTTCGACCACCTCAACCGCCTTGTCCAGCAGCTGGCCACCACTACTACCACCGATGGGCCGGACAAGGACCACCTCCTCAACCTCATCAACAAGGTGATGTCCCACTATGAAGACTTGTACCGGGCTAAGTCGGTGGCGGCGGAGAAGGACCCACTCCATGTTCTGACGTGTCCCTGGGCTACTACTCTCGAACGCTCGCTTCATTGGATCACTGGTTGGCGCCCCACCACCGCTTTCCACCTCATCTACACTGAATCTTCCCTCCTTTTTGAGTCTCACATCATCGACATCCTCCGCGGCCTCCACACCGGCGACCTCCGTGATCTCTCCCCCGTTCAGTTCCGCCGAGTCAGCGAGTTGCAATGTGACACAGTAAAGGAAGAAAATGCAATAACGGAGGAGCTGTCAGAATGGCAAGACAGTGCGAACGAGATCATGGCTCAATGTACGGATATCAATGAGAAGATCGGACGGCTAGTGAGCATCATAAAAAAAGCTGATGATCTACGGCTGAGGACGTTGAGGAGCGTAGTGGGGTTGCTGTCGCCGCAGCAGGCTATTGAGTTCCTAATTGCCTCGGCAGAGATGCTCGTTGGAATCCGCGGTTGGGGATTAAATCATGACCGTACACGTCGCAGGTAG 696 0.5388 MTTTTTTSLPFSQFYDLWFDHLNRLVQQLATTTTTDGPDKDHLLNLINKVMSHYEDLYRAKSVAAEKDPLHVLTCPWATTLERSLHWITGWRPTTAFHLIYTESSLLFESHIIDILRGLHTGDLRDLSPVQFRRVSELQCDTVKEENAITEELSEWQDSANEIMAQCTDINEKIGRLVSIIKKADDLRLRTLRSVVGLLSPQQAIEFLIASAEMLVGIRGWGLNHDRTRRR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3756 231 PANTHER - 5 230 - -
Lja3g3756 231 Pfam Seed dormancy control 25 102 IPR025422 GO:0006351|GO:0043565
Lja3g3756 231 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 5 230 - -
Lja3g3756 231 ProSiteProfiles DOG1 domain profile. 8 228 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3756 Lja-Chr3 74164189 74172128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3756 2 210 bZIP Transcription Factor Family AT5G06960 26.106 2.58e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3756 - - gsj:114374825 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3756 3 74164189 74172128 Lja3g3756 3 74164189 74172128 ECH