Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3748 ATGGCTTTCTCCTCCAATGACCGCGACAACTTCGTCTATGTTGCTAAGCTATCAGAGCAAGCTGAGCGCTACGATGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGATGGACGTTGAGCTGAGTGTGGAAGAGAGGAACTTGTTCTCTGTTGGGTACAAAAACGTGGTGGGGTCTCGGAGAGCTTCGTGGAGGATCCTATCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAGTGTTAAGCGTATCAGGGATTACAGGCACAAGGTGGAATTGGAGCTGTCCAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATCCCATCCACGAATGTTGCAGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGATTATTACCGGTATTTAGCAGAATTCAAGGCTGAGAATGAAAAGAAAGACGTAGCGGATCAGTCCCTTAAAGCATACGAGGCTGCTTCTGCCACTGCTGAGAGTGAATTACAACCTACACATCCTATCCGATTGGGCCTGGCTCTAAATTTCTCCGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCGCCTTGCAAAGCAAGCCTTTGATGATGCCGTCTCGGAGCTGGATACCCTGAATGAAGATTCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGCGAGACAACCTTGCTTTATGGACTTCTGATATCCCTGAAGATGGTGATGACCAAAAAATGGAAAGCGCAGCCATGGGTGGTGAAGGAGAAAATGAGTTGGGCCGCTAA 792 0.4571 MAFSSNDRDNFVYVAKLSEQAERYDEMVDAMKKVAKMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELSVKRIRDYRHKVELELSNICSDIMIILDEHLIPSTNVAESTVFYYKMKGDYYRYLAEFKAENEKKDVADQSLKAYEAASATAESELQPTHPIRLGLALNFSVFYYEIMNSPERACRLAKQAFDDAVSELDTLNEDSYKDSTLIMQLLRDNLALWTSDIPEDGDDQKMESAAMGGEGENELGR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3748 263 Pfam 14-3-3 protein 15 236 IPR023410 -
Lja3g3748 263 MobiDBLite consensus disorder prediction 238 263 - -
Lja3g3748 263 PIRSF 14-3-3 3 249 IPR000308 -
Lja3g3748 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Lja3g3748 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Lja3g3748 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Lja3g3748 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Lja3g3748 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Lja3g3748 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Lja3g3748 263 Gene3D - 1 251 IPR036815 -
Lja3g3748 263 PANTHER 14-3-3 PROTEIN 3 263 IPR000308 -
Lja3g3748 263 Coils Coil 14 34 - -
Lja3g3748 263 PANTHER GENERAL REGULATORY FACTOR 2 3 263 - -
Lja3g3748 263 SUPERFAMILY 14-3-3 protein 6 238 IPR036815 -
Lja3g3748 263 SMART 1433_4 8 249 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3748 Lja-Chr3 74079860 74083997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3748 4 257 14-3-3 family AT2G42590 74.609 2.58e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3748 K06630 - gmx:100806167 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3748 3 74079860 74083997 Lja3g3748 3 74079860 74083997 ECH