Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3739 ATGTCGGTGATCGAGCTTCTCTTCCGTGTCGACTCCATTTGCCAGAAATATGACAAATACGACATTGACAAGCAGCGCCAGCTCAATGCCTATGGCGATGATTCCTTCGCTCGCCTCTATGCGACAGTCGAGTCCATCATTCAAGCTGCTCTCAATAAATCTGAGGCTGCTTCCACGGAGAAGAATAGGGCGGCGGCTGCCGCGTTGAATGCGGAGGTTCGTCGTGCCAAGGGTAGATTGATGGATGAAATTCCTAAACTCCGCAAACTCGTCAATAAGAAGGTTAAAGGTCTCACAAATGAAGAAATGACCATACGTCAGGATCTTGTTATGGCATTGCCAGAAAGAATCCAAGCAATACCAGATGGTATTACTGCTGCTGCTAATCATACTGGAGGATGGGATGCTACCTCATCACACCCCCATATCAAGTTTGATTCATCAGAGGCACATTTGGACAGTGAGTATTTCAACCAAAGTGAAGAATCCAATCAGTTTCGACAAGAGTATGAAATGCGCAGGATGAAACAGGATGAAGGACTTGATATCATATCAGAGGGACTGGCTACCTTAAAAAATTTGGCTCATGACATGAATGAGGAAATAGATCGGCAAGTTCCTCTAATGGATGAAATTGACACAAAGGTGGATAAGGCAACGGCTGATGTGAGAAACACTAATGTCAGGCTGAAGAATACCCTCACCCAGCTGCGGTCAAGTCGAAATTTCTGCATTGACATTGTCTTGATGTGTGTTCTTCTGGGAATCATTACCTATATATACAATGCATTGAGGTAA 798 0.4449 MSVIELLFRVDSICQKYDKYDIDKQRQLNAYGDDSFARLYATVESIIQAALNKSEAASTEKNRAAAAALNAEVRRAKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAIPDGITAAANHTGGWDATSSHPHIKFDSSEAHLDSEYFNQSEESNQFRQEYEMRRMKQDEGLDIISEGLATLKNLAHDMNEEIDRQVPLMDEIDTKVDKATADVRNTNVRLKNTLTQLRSSRNFCIDIVLMCVLLGIITYIYNALR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3739 265 PANTHER SYNTAXIN-72 1 262 - -
Lja3g3739 265 SMART tSNARE_6 166 233 IPR000727 -
Lja3g3739 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Lja3g3739 265 SUPERFAMILY SNARE fusion complex 163 232 - -
Lja3g3739 265 Gene3D - 170 232 - -
Lja3g3739 265 PANTHER SYNTAXIN 1 262 IPR045242 -
Lja3g3739 265 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lja3g3739 265 CDD SNARE_Qc 176 231 - -
Lja3g3739 265 Pfam SNARE domain 208 257 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3739 Lja-Chr3 73999384 74002306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3739 1 265 SNARE and Associated Proteins AT3G09740 63.670 2.81e-130 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3739 K08506 - gmx:100777251 441.81