Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3731 ATGGAGAGTGACACAGTCACAAACACTTCCCCTATTTCCCCTCAAGTTGTGATGAGTCCATGTGCTGCTTGCAAGATTTTGAGGAGAAGATGTGCTGAGAAATGTGTGTTGGCACCTTATTTTCCTCCCACCGAACCTGCCAAGTTCACCATTGCTCATCGAGTCTTTGGTGCTAGCAACATTATCAAGTTCTTACAGGAACTTCCAGAGTCTCAAAGAGCAGATGCAGTGACCAGCATGGTTTATGAGGCTGGTGCAAGAATAAGAGACCCTGTGTATGGATGTGCAGGTGCAATTTGCCAGCTCCAAAAGCAAGTGAATGAGCTTCAAGCACAATTAGCTAAAGCACATGCTGAGCTTGTAAACATGCAACTCCAACAAGCCAATCTTATGGCTCTAATTTGCATGGAAAAAATGGTAGAAACTCCAATGCAGGAATCACCACCACAGAAATCAGTGGATAACTTCTTCATTTCAAGTCCTTCCAGCAGCAGTGACTATCAAAATGATCTCAACTTCTTTGAGGAGAATATTACTGGCCTAAACTCATTGTGGGAGCCTCTTTTGACATGA 573 0.4363 MESDTVTNTSPISPQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEAGARIRDPVYGCAGAICQLQKQVNELQAQLAKAHAELVNMQLQQANLMALICMEKMVETPMQESPPQKSVDNFFISSPSSSSDYQNDLNFFEENITGLNSLWEPLLT* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3731 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 12 187 - -
Lja3g3731 190 Pfam Lateral organ boundaries (LOB) domain 20 117 IPR004883 -
Lja3g3731 190 Coils Coil 99 126 - -
Lja3g3731 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 187 - -
Lja3g3731 190 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3731 Lja-Chr3 73848013 73849838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3731 16 190 AS2 family AT2G28500 65.946 5.76e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lja3g3731 LOB 3.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3731 - - gmx:100819336 295.049