Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3713 ATGCAAAAACTACTTCCATGCCGGTCGGCGTCGGAGTTTGTGAAGTCCTTATTCGCATCTTATACGGGGGACGCTCTTGCTGATTTTTCTTCCCCATCTCTCGCATATGTCCATCCACCCGATCGAAGTAGTCAACTAGGAGAACCACAGCGGCAGCTGCCGTCTCTTCCTCCTTCTCACCATCATAGATGTGAAGGTGGGACTGACACTTCTCGGAGTTCCCTCGCCGCCTCCCTCGACGAAAGGCGCGACTGTTGCGCCGCGTCAGCGCCGACGAGCGGGGTGTCGTCAGCACGCTTGAGAAACTCAGAATTCGTCTCTTCTCCCTCAGCCACTCAGCTCAGCAGAAGAGAGAGAGACGCACTGCGTCTCAGCCAAGCCATGAATGAAGATAGTTTGATAGCAAAAAGTGATGTAGTAGAGGTACACGAAGACAGATGGGAAGATCGTGACGTCGCATGTAAGAGGACTAGAGATAAAGTAAAAGCAAAACTTGAAATTGCAGCATATAAGGAGCACGACAATGGTCGAAACATTGTCCGTTTGTATCATCACGCTGAACATGATAATTATATGGAGCTCTATCTAGAGCGAGCTAAATGTACACTGTTTGAGCTGATCATTTATGTTGCATCCGTAACGAAATCCCACCATGAAAATGAGAAGAAAGATGCCTTCCTTAACAACGTCATCTCTCATTATCATTTGTGGGATGCTCGGACTGGCCGCTTGCGCGCCAAAGTCTCCATGAGTCGTGGTCACACTCAAGGATGGCTAGCCCCAGAGTTGACCCAACAACCCCCACAAGAAACATTAGAACTAGACCGTTTCGGGTTAGGCTTAATCATCTATTTCTGCCTATCAAAGGGAAAGCATCCCTTTGGAAATTTGCAAAATATGAACAAGTTGCAATTTAACATCAACAATGGTGTGAAGCACTGGCCTCCCAATCCTATTTGTCGTTTAGAAGGCAAACACCTTGTGGAGGATCTAGTAAGCTTTTCCCCGGGTGAGAGGCCGAATACAAACTATGTCCACGCCCATCCTTTGTTTTAG 1056 0.4773 MQKLLPCRSASEFVKSLFASYTGDALADFSSPSLAYVHPPDRSSQLGEPQRQLPSLPPSHHHRCEGGTDTSRSSLAASLDERRDCCAASAPTSGVSSARLRNSEFVSSPSATQLSRRERDALRLSQAMNEDSLIAKSDVVEVHEDRWEDRDVACKRTRDKVKAKLEIAAYKEHDNGRNIVRLYHHAEHDNYMELYLERAKCTLFELIIYVASVTKSHHENEKKDAFLNNVISHYHLWDARTGRLRAKVSMSRGHTQGWLAPELTQQPPQETLELDRFGLGLIIYFCLSKGKHPFGNLQNMNKLQFNINNGVKHWPPNPICRLEGKHLVEDLVSFSPGERPNTNYVHAHPLF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3713 351 ProSiteProfiles Protein kinase domain profile. 59 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3713 351 SUPERFAMILY Protein kinase-like (PK-like) 142 351 IPR011009 -
Lja3g3713 351 MobiDBLite consensus disorder prediction 38 75 - -
Lja3g3713 351 Gene3D Transferase(Phosphotransferase) domain 1 99 238 - -
Lja3g3713 351 PANTHER IRE1-RELATED 128 351 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lja3g3713 351 SMART serkin_6 128 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3713 351 Gene3D Transferase(Phosphotransferase) domain 1 239 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3713 Lja-Chr3 73594253 73597229 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lja3g3713 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3713 K08852 - lja:Lj4g3v1330210.1 101.679