Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3700 ATGATGGGTTTTGCTAATCCAAGATCTGAAAGGCATGAAGATGATCCTGAAGTAGAAAAGTTCCCTTCAACTAGCGGTGAAAGTGGGATTAAGATTAAATACAACATTGATGGAACAAAAATACCTGAGCATAGTTCCAAAAGGGCTCAAAAGAGGGTAGCAGGGAAGACAGGGAAGTTCTTGAAAGCAAGAGTACTGTCAAGAGTGTTCTCAGAGGACTACGAGAGAGTGAAGAGAAGGGTGTTAGATCCTCGCGGACAAACAATCCACCGTTGGAACAAGATTTTCTTAATAGCATCATTAGTGTCTTTGTTTGTAGACCCGTTGTTCTTTTATTTGCCAGTGGTTCAAGATGAAGTGTGCATAGACATTGGAACAACTCTTGAAGTTATCCTTACAGTTGTTAGATCAGTTGGGGATGTGTTTTACATGATTCAGATTATGATGAAGTTTCGTACAGCTTATGTTGCTCCTTCTTCACAAGTATTTGGGAGAGGAGAACTTGTTCTAGGCTATTCTAAGATTGCTGTTAGGTACCTCAGAAAGGGATTCTGGTTAGACTGTGTAGCTGCATTGCCCCTTCCTCAGGTATTGATTTGGATTATTATCCCAGTTCTTAGGGGTTCAACCATGGCAAACACGAAAAACGTGCTTCGCTTTTTCATCATTTTCCAATATGTTCCAAGACTTTATTTGATTTTCCCACTTTCATCACAAATTGTGAAAGCTACAGGGGTTGTGACAGAAACAGCTTGGGCAGGTGCTGCTTACAACCTGATGCTTTACATGCTGGCTAGCCATGTTTTAGGAGCTTGCTGGTACCTTCTATCAATCGAACGACAAGAAGCATGTTGGAAAAGTGCGTGCAATCTGGAGAATTCATCTTGTCATTATGGATTCTTTGATTGCCATAGGGTTAATGATGCTATCAGGGTGTCCTGGTTTACAGCTAGTAATATCACAGATTTATGTTCACCAAAAGCTGATTTTTATCCCTTTGGTATATATGCTGATGCTGTGACTTCTCAAGTTACATCCTCTGCATTCTTCAATAAGTACTTCTTTTGTCTCTGGTGGGGTCTAAGAAATCTGAGTTCTTTGGGCCAAGGACTTTTTACTAGCACTTTTGTTGGAGAAATAATGGTAGCCATTGTTGTTGCAACCCTTGGATTGGTTCTTTTTGCGTTGCTGATTGGTAATATGCAGACATACCTACAATCATTAACAGTTCGCCTAGAAGAGTGGAGAGTAAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCAAGAACTAAGAGAGTCTGTGCGTAAATATGATCAATATAAATGGGTAGCTACACGAGGAGTAGATGAAGAAACTATTCTTAAAGGACTTCCATTGGATCTCAGGAGAGACATCAAGCGCCACCTCTGTCTCGAATTAGTTAGAGGAGTTCCACTGTTTGATCAAATGGATGAGAGGATGCTAGACGCAATATGTGAAAGGCTAAAGCCTGCATTATGCACTGAGGGAACCTATCTTGTTCGTGAGGATGATCCTGTGAATGAAATGCTCTTCATAATTCGAGGAAACCTAGACTCCTACACTACCAATGGAGGCCGTGCTGGATTCTTCAACTCATGTCGAATCGGCTCAGGTGATTTTTGCGGTGAAGAGCTATTAACATGGGCTTTGGACCCGAGACCGAGTGTGATACTCCCTTCTTCAACTCGAACAGTTAAAGCCATCTCAGAAGTAGAGGCCTTTGCACTTATAGCTGAAGACCTGAAGTTTGTTGCATCACAATTCAGAAGGCTACACAGCAAACAACTAAGGCATAAATTCAGGTTTTACTCACACCAATGGAGAACTTGGGCTGCTTGTTTCATTCAAGCTGCATGGAGAAGGCACAAGAAAAGGAAAGGAGTTGCTGAGCTAAGGGCTAAGGAGAATGTGTTAGTTTCTGAGCCTGTAACACCAAAATCTGGTTCAGGTTTTGTTGGGTATCCAACAAGGATGGGTAGAAGCACTAGGAAAAGTGTCAATGTGCATTCTGGGACAAATTCTGGAGTAGTCACTTCTTTTCAGAAGCCAGCAGAGCCAGATTTTTCTGTTGTTGAATAA 2115 0.4156 MMGFANPRSERHEDDPEVEKFPSTSGESGIKIKYNIDGTKIPEHSSKRAQKRVAGKTGKFLKARVLSRVFSEDYERVKRRVLDPRGQTIHRWNKIFLIASLVSLFVDPLFFYLPVVQDEVCIDIGTTLEVILTVVRSVGDVFYMIQIMMKFRTAYVAPSSQVFGRGELVLGYSKIAVRYLRKGFWLDCVAALPLPQVLIWIIIPVLRGSTMANTKNVLRFFIIFQYVPRLYLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWKSACNLENSSCHYGFFDCHRVNDAIRVSWFTASNITDLCSPKADFYPFGIYADAVTSQVTSSAFFNKYFFCLWWGLRNLSSLGQGLFTSTFVGEIMVAIVVATLGLVLFALLIGNMQTYLQSLTVRLEEWRVKRTDTEQWMHHRQLPQELRESVRKYDQYKWVATRGVDEETILKGLPLDLRRDIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREDDPVNEMLFIIRGNLDSYTTNGGRAGFFNSCRIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKGVAELRAKENVLVSEPVTPKSGSGFVGYPTRMGRSTRKSVNVHSGTNSGVVTSFQKPAEPDFSVVE* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3700 704 Gene3D - 95 409 - -
Lja3g3700 704 MobiDBLite consensus disorder prediction 1 30 - -
Lja3g3700 704 Gene3D Helix hairpin bin 412 475 - -
Lja3g3700 704 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 702 - -
Lja3g3700 704 CDD CAP_ED 484 615 IPR000595 -
Lja3g3700 704 ProSiteProfiles IQ motif profile. 620 648 IPR000048 GO:0005515
Lja3g3700 704 Gene3D Jelly Rolls 482 602 IPR014710 -
Lja3g3700 704 PANTHER - 6 702 - -
Lja3g3700 704 SMART cnmp_10 484 615 IPR000595 -
Lja3g3700 704 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Lja3g3700 704 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja3g3700 704 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja3g3700 704 PRINTS EAG/ELK/ERG potassium channel family signature 147 156 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja3g3700 704 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja3g3700 704 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lja3g3700 704 ProSiteProfiles cAMP/cGMP binding motif profile. 484 581 IPR000595 -
Lja3g3700 704 MobiDBLite consensus disorder prediction 7 21 - -
Lja3g3700 704 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lja3g3700 704 SUPERFAMILY cAMP-binding domain-like 414 610 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3700 Lja-Chr3 73325419 73329197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3700 58 701 Ion Channels AT2G28260 75.659 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3700 K05391 - gmx:100811847 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3700 3 73325419 73329197 Lja3g0852 3 8663688 8669775 PCT