Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3686 ATGTGCAAGACCAAAATGGCGATCAACGCCACAAGTCCCACCTCAACCCCACGAACACCATCAACAACATCATCAACCGCACGTGCAAGTGCAACCTCCCTCACATTCTCCGACCAAAACCCCTCCACCTCCTACGCCTCCACCTCCGCCTCCACCGGCTACCGTCTCTCCTCCTCCAACTCCATCTCCACCAGCAGCCGCAACTCCCTCCCCACTCTCCGCGAAACCCTCCCGGAAAATCCCCACATCTACGACTTCTCCGAGATCCGCGCCGCCACCAACAACTTCCTCTCCAAACGCCACTCCTCCTCCACCCCTTGCTGGCGCTGCACGCTCCGCGGCGCCGACGTCATCGTCTTCCAACGCAAGCTCCGCCGCAAGATCAACGACCTCCGTAGCCTCCTATCCATCATCTGCCGCTGCCACCATGTTAACATCGTGAAGCTTCTCGGCGCGTCGATCTCCGGTGACCATGTCTACCTCGTTTACGACTTCGTCGCCGGTGGTAACCTCGCCGATTGCCTCCGTAACGCGAGGAACGCGAACTTCACCGTGCTTTCTACCTGGATGTCGAGAATGCAGGTTGCGACGGATCTCGCTCACGCGCTTGATTACGTGCACAATAAGAACGGTGTGAGCATCGATTTCGTCCATAACCATATCAAGAGCAGCGCAATCATCGTTACCGAGCCTGATTTCAACGCTAGGGTTTGCCATTTCGGCGCCGCGCAGCTATGCGGCGAGGTAGAGAACCAATTCGCCACCGCCGGTGAGAAATTGGGGGAGATCGTGGAGGAATCGCCGCCGGCGAGGCGGTCCGGGAGGCCTGAGGTACAGTTCTCGGGGGTGAGGGGGTATATGTCGCCGGAGTATCAAACCACCGGCGTGGCGACGCAGGAGTCTGACGTGTACGCGTTTGGGGTGGTGTTGCTGGAGCTTCTCTCCGGGGAGGAGCCGTTGAAGTTCCGGTTTGATGAGAAGACGCGTGATTTTGTGAGGATATCGGTGGTTGAGACGGCGAGGGTGGCGGTTGATGGCGGCGGCGGTGGCGGCGTGAGGAGGTGGGTGGATAGGAGGTTGAAGGATTCGTTTCCGATTGATATTGCGGATAAGTTGACACGTGTAGCGTTGGATTGTGTACACGTGGAGGCAGATAAGAGGCCGAACATGAGTAGAGTGGCTGATAAGGTTTCCACTCTTTATTTAAAGTCGAAGAATTGGTCTGAGAGTATTAAGATGCCTGATATGTCTGTTTCACTGGTTCCACGATGA 1272 0.5684 MCKTKMAINATSPTSTPRTPSTTSSTARASATSLTFSDQNPSTSYASTSASTGYRLSSSNSISTSSRNSLPTLRETLPENPHIYDFSEIRAATNNFLSKRHSSSTPCWRCTLRGADVIVFQRKLRRKINDLRSLLSIICRCHHVNIVKLLGASISGDHVYLVYDFVAGGNLADCLRNARNANFTVLSTWMSRMQVATDLAHALDYVHNKNGVSIDFVHNHIKSSAIIVTEPDFNARVCHFGAAQLCGEVENQFATAGEKLGEIVEESPPARRSGRPEVQFSGVRGYMSPEYQTTGVATQESDVYAFGVVLLELLSGEEPLKFRFDEKTRDFVRISVVETARVAVDGGGGGGVRRWVDRRLKDSFPIDIADKLTRVALDCVHVEADKRPNMSRVADKVSTLYLKSKNWSESIKMPDMSVSLVPR* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3686 423 Gene3D Phosphorylase Kinase; domain 1 57 165 - -
Lja3g3686 423 ProSiteProfiles Protein kinase domain profile. 56 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3686 423 MobiDBLite consensus disorder prediction 1 74 - -
Lja3g3686 423 Pfam Protein kinase domain 130 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3686 423 SUPERFAMILY Protein kinase-like (PK-like) 87 397 IPR011009 -
Lja3g3686 423 Gene3D Transferase(Phosphotransferase) domain 1 166 416 - -
Lja3g3686 423 PANTHER OS09G0572100 PROTEIN 1 423 - -
Lja3g3686 423 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3686 Lja-Chr3 73097209 73098794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3686 79 411 Receptor kinase-like Gene Family AT1G51940 30.499 8.69e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lja3g3686 Pkinase 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3686 - - gmx:100792694 550.051