Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3681 ATGGTTCAAGAGAGGCTTGTTAGGGAGAGTCACAGCGATGACCCATGGGTTTGCAATGATGCTTTTTTGAGAGAATTGCACAGGATACTCATCGGTATGTTTTGCTGCCTTGATGTTGAAGTTCTGAATTCTATGGCAGTCACAAATGAGCATTTCCACACTGCACTAGGAACAAGCAACCCATCAGCTTTACGTGAAAGTTTTTTTTACCCCTATATTTATGTTGTTGAGATTCCTAATGAGAATGTCAAGAGTGAAATCCAAGAAACCGTTCAATATCCTGTTGAGCACCCAGAAAAGTTTGAGAAGTTTGGCATAACTTTGTTAGCCAAAGAAATTACTAATGAATGTCAAGCTAATTTCATCCGTGTGAAAGACCCAAAATTGCTTACAATGTGGTTTGGTGAAAGTGAAGCCAATGTTCGAGAATTTAATTGCTGCTGCTACCTGTACTTGAATATATGTCATTGTGTCCTTCCTGAAGAGAGGAAGTAG 495 0.3939 MVQERLVRESHSDDPWVCNDAFLRELHRILIGMFCCLDVEVLNSMAVTNEHFHTALGTSNPSALRESFFYPYIYVVEIPNENVKSEIQETVQYPVEHPEKFEKFGITLLAKEITNECQANFIRVKDPKLLTMWFGESEANVREFNCCCYLYLNICHCVLPEERK* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3681 164 Pfam ATPase family associated with various cellular activities (AAA) 105 144 IPR003959 GO:0005524|GO:0016887
Lja3g3681 164 Gene3D - 81 143 IPR027417 -
Lja3g3681 164 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D 32 144 - -
Lja3g3681 164 PANTHER AAA-FAMILY ATPASE 32 144 - -
Lja3g3681 164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 143 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3681 Lja-Chr3 73024163 73030885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3681 43 144 Calmodulin-binding Proteins AT3G56690 30.000 1.49e-12 62.8