Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3649 ATGAATCTCTGGTCCGACGACAACTCCTCCGTCATGGAAGCTTTCATGAGCTCCTCCTCCGACCTCTCCTCTCTCTGGCCACATCCCGTCGTCTCCGCCACCGCTCCTGGACCTGACCTGACCCGATCGTCACAGCCGATGCTCTACCATGAAACCCTCCAGCATTGTCTTCAGACGTTGATCGAGGGTGCCAAGGAGAGTTGGACCTACGCCATCTTCTGGCTGCCGTACGACTACTCCTCTGGTACCCTTCTTCTTGGCTGGAGCGATGGGTACTACAAGGGAGAGGAATACAATGAAAAGGCTAAATCCACCAAAACGGCGTCGTCATCCACCGAGCAGGACCACCGCAAGAAGGTCTTCCGGGAACTCCATTCGTTAATCTACGGCAACACCGCCTCCCCATACGACGTTGTCGACGAAGAGGCCCGCCAGGGTCAGCTCTTCGGACTCCGGACTTTGGTTTGCATACCGACACCGTGTGCCAACGGCGTCGTAGAGCTTGCATCGACGGAAGTGATTCCTCATTGCCCTGATCTGATAAACAAGGTGCGGATTTTGTTCAACTCCAACAACAACAACAACAGCCACCACAGTAACAACCTCGACGTGACGGGTTACGGCGGGGTACGGCGAGAACGACCATTCTTCCCTCTGGCTCAACGATCCCTCCTCTAG 678 0.556 MNLWSDDNSSVMEAFMSSSSDLSSLWPHPVVSATAPGPDLTRSSQPMLYHETLQHCLQTLIEGAKESWTYAIFWLPYDYSSGTLLLGWSDGYYKGEEYNEKAKSTKTASSSTEQDHRKKVFRELHSLIYGNTASPYDVVDEEARQGQLFGLRTLVCIPTPCANGVVELASTEVIPHCPDLINKVRILFNSNNNNNSHHSNNLDVTGYGGVRRERPFFPLAQRSLL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3649 225 PANTHER TRANSCRIPTION FACTOR MYC2 1 142 - -
Lja3g3649 225 PANTHER TRANSCRIPTION FACTOR MYC2 141 208 - -
Lja3g3649 225 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 53 132 IPR025610 -
Lja3g3649 225 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 141 188 IPR025610 -
Lja3g3649 225 PANTHER MYC 141 208 IPR045084 GO:0003700|GO:0006355
Lja3g3649 225 PANTHER MYC 1 142 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3649 Lja-Chr3 72416127 72416948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3649 1 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 43.600 5.64e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3649 K13422 - lja:Lj0g3v0264259.1 429.098