Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3642 ATGGCGTTAACTTGGCCGCACCTACTGCAGTTTCATTCTCAACCGCGCGCCAACTTCGTCTTCTTCTCCGATCTCGCCGAATTCCGCTCCCTCGAACCGCCATGCCTCGATTCCCTCAACCTTCTCCGCCGGAGCAAGATCTTCGTCGCATCTCCGCCGCTGCTGAAGCCGGTGAAGTGCATCGGCAGCAGATCCACGGAGGAGAAGCAGTGGAGTGAAGAAGCCGAGACCGCAGCAGCGTCTGACTCCGATGAAGCTGCGGCGGATGATGCTAATGGTCAGGTTCCGACCTCAACAACCGTTCCTGCAAGTGAATGTGTTGAGTCTCAGAGAATTGCAACCACTTCTTCCGGCGATTCGCTCTCTCTCGGGATTCGGGAACCGGTTTATGAAGTTGTAGAAGTGAAATCCAATGGGACAGTATCGACCAGGAAAATCAACAGGAGACAATTATTGAAGTCTAGTGGTCTTCGTCCACGAGACATACGAAGTGTGGATCCGTCATTGTTTTTGACAAATTCAATGCCTTCTTTACTGGTCCGTGAGTATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACTATAATCGTAAAGGAGGGCAAGCTTTTCTAGAGTCACTGCTGCCTCGGTTGAACCCCAAGAACAACAATGGAGGTCCATCAATGCCATTTGAACTCGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAACGCTTGGAGCAGAGACTGGTGCGCTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGCCTTGCCAAATCGGATAACTGGCGATATATTGGAGCAACTTCGTACTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAAGGCAGGATCACTCAGACAGATGCTGCTTGACCTTCTGGAGGACCCCGATGAAATACGCCGGATATGTATCATGGGAAGAAACTGCATACTTAATAGAGGAAACCATAATGTGGAATGCTCACTGCCCTCAGAAAAGCAGATTGCTGAGGCGGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGACTTCTTGATTCTGCCAGGGAAATGGAAGATTCTATAGGTGTCAGTTTGAGCTCACGAAGGCTTGAGGTTAGCAGAGTGGAACTGCTTCTTCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTCGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAGCAAGTGCTTGCATTTTGGCTGACAACCGCTGGGATAATTATTGGTGGTATAATTGCTTTTTTTCTTATGTATTCCTACCTCAGGGCAAGGAAAATCTTCTGA 1380 0.4739 MALTWPHLLQFHSQPRANFVFFSDLAEFRSLEPPCLDSLNLLRRSKIFVASPPLLKPVKCIGSRSTEEKQWSEEAETAAASDSDEAAADDANGQVPTSTTVPASECVESQRIATTSSGDSLSLGIREPVYEVVEVKSNGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLEQRLVRLEPRVQALLEALPNRITGDILEQLRTSKQTLVELGSKAGSLRQMLLDLLEDPDEIRRICIMGRNCILNRGNHNVECSLPSEKQIAEAEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIGVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEQVLAFWLTTAGIIIGGIIAFFLMYSYLRARKIF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3642 459 Coils Coil 248 268 - -
Lja3g3642 459 Coils Coil 339 359 - -
Lja3g3642 459 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 65 458 - -
Lja3g3642 459 Gene3D - 125 206 - -
Lja3g3642 459 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 65 458 IPR039204 -
Lja3g3642 459 Gene3D Magnesium transport protein CorA, transmembrane region 207 390 - -
Lja3g3642 459 MobiDBLite consensus disorder prediction 66 102 - -
Lja3g3642 459 CDD Mrs2_Mfm1p-like 132 458 IPR039204 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3642 123 459 MRS2 Gene Family AT5G22830 83.086 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3642 K16075 - gmx:100808371 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3642 3 72209186 72221354 Lja3g3642 3 72209186 72221354 ECH