Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3631 ATGACGATGGGTTTGAAACTCTCTTGTACTCTCTTCATTTTCTTTCTACTTGTTCTTGAATTTCTAGCTTTTGCCAAAGGAAAGAATGAGAGTCACAATCTTTATAGCAGTAATGTTTTGATAAGTGGCACCATAGTTGTTAGTCAAGATGGAAGTGGAAACTTCAGCAATATCAATCAAGCCGTGGCTGCTGCACCAAATAACTCTGATGCAAGAAATGGCTATTTCTTGATTTATATTAAAGAGGGAAAGTATGAAGAATATGTGTCAATACCTGAGAGCAAGACGTATCTCATGATGGTTGGACAAGGAATCAACCGAACAATCATTACTGGCAATCGCAGCCATGGTGATGGATGGCAAACATATGAATCTCAAACATTTGTTGTGGCAGCGACAGGATTTGTAGCAGTTAATATCACATTTCAGAACACTGCTGGGCCCAAAAAAATGCAAGCAGTTGCATTAAGAAATGAAGCAAATTTGTCCACCTTTTACCGTTGCAGCTTTGAAGGGTACCAGGATACTCTTTGTGTAGATTCTAAGAAACAATTCTACAGAGAGTGTGACGTATATGGAACAATCGATTTCATATTCGGAAATGCTCAGGTTGTTTTGCAAAACTGCAACATATATCTGCGTCTTCCTTTAGATGGACAATTCAATGTTATTGCTGCCCAAGGAAGAACAAGCCCAATAAATGACACTGCCATTTCCATTCAGAATTGCAATATCAGGCCTGCTGATGATCTAGCTTCGAGGCCAATTGGTAGTGTGAAGACTTACCTTGGAAGGCCCTGGCAAGAGTACTCGAAAACCATTGTTATGCAATCATTCTTGGACAGTTTAATAGACCCAGCTGGTTGGTCTGTATGGAACGATACTGGTTTTGCACTCTCTACGTTGTATTTCGCAGAATATGACAACAAAGGACCCGGGGCAAACACTTCCAGTAGAGTGAGATGGGCTGGTTACCATATCATAAATGATATTGATGCTGCAAAATTTACGGTAGCCAATTTTCTGAAAGGCAATGATTGGTTGCCTCAAACTGGAGTGCCTTACATTCCTGGACTCATAACTTAA 1086 0.4015 MTMGLKLSCTLFIFFLLVLEFLAFAKGKNESHNLYSSNVLISGTIVVSQDGSGNFSNINQAVAAAPNNSDARNGYFLIYIKEGKYEEYVSIPESKTYLMMVGQGINRTIITGNRSHGDGWQTYESQTFVVAATGFVAVNITFQNTAGPKKMQAVALRNEANLSTFYRCSFEGYQDTLCVDSKKQFYRECDVYGTIDFIFGNAQVVLQNCNIYLRLPLDGQFNVIAAQGRTSPINDTAISIQNCNIRPADDLASRPIGSVKTYLGRPWQEYSKTIVMQSFLDSLIDPAGWSVWNDTGFALSTLYFAEYDNKGPGANTSSRVRWAGYHIINDIDAAKFTVANFLKGNDWLPQTGVPYIPGLIT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3631 361 ProSitePatterns Pectinesterase signature 2. 191 200 IPR033131 -
Lja3g3631 361 Gene3D - 39 359 IPR012334 -
Lja3g3631 361 PANTHER PECTINESTERASE 34 357 - -
Lja3g3631 361 Pfam Pectinesterase 45 345 IPR000070 GO:0030599|GO:0042545
Lja3g3631 361 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 34 357 - -
Lja3g3631 361 SUPERFAMILY Pectin lyase-like 41 358 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3631 Lja-Chr3 71912106 71913340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3631 39 361 Carbohydrate Esterase AT1G02810 62.848 8.03e-150 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3631 K01051 - twl:119984544 453.366