Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3617 ATGAGGTTGGAGAAATGCTGGTTTTGTTCTTCAACTGTATTCCCGGCTCTGGACATGGAATCCAGTTTGTCCATTTTTCGGTTCTATAGATCCAAATGCCACAAGAACTTTAAAATGAAGAGGAATCCTCGTAAAGTAAAATGGACCAAGGCATATAGGCGAGTGCATGGAAAGGAGATGACAAGGATTCAAACCTTTGAGTTTGAGAGAAAGCGAAATAGGCCTGAGAGATATGACAGGAATGTTAAGGAGGATGTCCTCAAGGCCATTCCTAAGATTGCTAAGATCAAAGCCAGCAGGGAGGAGACACACCATAAGAAAATAAAAGGAGTTGAAGCAGGGCATCAACATGGTCAATTGGTCAAAGCTCCTTCTGTTTTTCAACAGGATCCTTCATACACTTTACCAATCAAGGTCAAGGTTTCCCAACAGAAATCAGTGGAGAATCAGCCTATGGAAGAATGA 465 0.4194 MRLEKCWFCSSTVFPALDMESSLSIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKRNRPERYDRNVKEDVLKAIPKIAKIKASREETHHKKIKGVEAGHQHGQLVKAPSVFQQDPSYTLPIKVKVSQQKSVENQPMEE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3617 154 PANTHER 60S RIBOSOMAL PROTEIN L24 1 154 IPR000988 -
Lja3g3617 154 PANTHER BNAA04G10330D PROTEIN 1 154 - -
Lja3g3617 154 CDD Ribosomal_L24e_L24 1 51 IPR000988 -
Lja3g3617 154 Gene3D Ribosomal protein L24e 1 65 IPR038630 -
Lja3g3617 154 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 53 - -
Lja3g3617 154 Pfam Ribosomal protein L24e 1 61 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3617 Lja-Chr3 71632553 71633536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3617 1 154 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 55.090 3.97e-56 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3617 3 71632553 71633536 Lja3g3617 3 71632553 71633536 ECH