Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3604 ATGGGTTCTGAAGCTCCACTATCATGTTCACAATCCATGCCAACCACCACGGCCTTCTTGTTTTTCTCCTTCACCATCGTCTTCTCTGCATTCTCCTTCCTCATCTTCATCTCCAGGATCAAGCCATGGTGTAACTGCGACACCTGCACCACCTTCATGACTGCGAGTTGGTCCTCCAAGTTCACCAACCTTTGCGACTGGTACACTCACCTCCTCCGTGACTCACCCACCGGAACCATCCACGTGCACGTGCTCAACAACACCATCACGTGCAACCCCCACAACGTGGAGCACATGCTAAAGACCAACTTCCACAACTACCCCAAGGGAAAACCCTTCTCTGCCATCCTCGGCGACCTCCTCGGCCGCGGAATATTCAATGTTGATGGTCACGAATGGAGCTTCCAGCGTAAAATGGCCAGCCTCGAGCTCGGAAGTGTGGCAATTCGCTCCCACGCGCTGGAGATAGTCAATGAGGAGATTCACACAAGGCTCGTTCCTTTCATGGTCGCCTCAATTGGAGTCGTTGACTTGCAAGACATCCTGCGACGGTTCTCCTTCGACAACATCTGCAAATTCTCATTTGGATGGGACCCACACTGTCTCCAAATGTCACTACCAGTGTCGGACCTTGCTGTCGCATTCGACACCGCCTCAAAGCTCTCAGCAGAGCGCGCCATGACATCATCGCCTGTAATATGGAAGATCAAGCGATTCCTCAATTTAGGGTCTGAAAAGAAGCTAAAGAAAGCTATCAATGTGGTGAATGAGCTAGCGAAAGACATGATCAACAACCGAAGAGAAATGGGGTTCTCCACGCGAAGAGACCTTCTCTCGAGGTTCATGGGTTCGGTCAATGACGACGACAAGTATCTCAGAGACATTGTTGTAAGTTTCCTCTTAGCAGGCCGTGACACGGTGGCCTCAGGGTTGACATGTTTCTTCTGGTTACTATCAAATCACCCCAAGGTGGAAGCTTTGATTCGAGAGGAGGTGGATCGTGTTATGATTCCGAAACAAAACTCGGTTCAGGGGTTCGCTAGCTTTGAACAGCTTCGTGAAATGCAATATCTAAATGCGGCGATTTACGAAAGCATGAGGTTGTACCCTCCAGTTCAATTTGACTCAAAATTCGCACATGAGGATGATGTGTTACCGGATGGGACATTTGTACGGAAGGGAACGAGGGTCACGTACCATCCTTATGCTATGGGTCGAATGGAGCGGGTATGGGGCCTCGATTGCCTTGAGTTCAGGCCCGAGAGATGGTTAAAGGATGGTGTGTTTGTGCCAGAGAATCCGTTTAAGTACCCAGTTTTTCAAGCTGGTGTTAGGGTGTGTTTGGGAAAAGAGTTGGCTTTGGTGGAAATGAAGGCGGTTGTGGCTGCCTTGGTTGGAAGGTTTGATATTCGGGTAGTGGGGTTGCATTCGGAGCCACAGTTTGCCCCGGGACTTACTGCCACATTGCGGGGTGGGTTACCAGTTCAAGTTTCTGAAAGATGTAGTTGA 1509 0.5003 MGSEAPLSCSQSMPTTTAFLFFSFTIVFSAFSFLIFISRIKPWCNCDTCTTFMTASWSSKFTNLCDWYTHLLRDSPTGTIHVHVLNNTITCNPHNVEHMLKTNFHNYPKGKPFSAILGDLLGRGIFNVDGHEWSFQRKMASLELGSVAIRSHALEIVNEEIHTRLVPFMVASIGVVDLQDILRRFSFDNICKFSFGWDPHCLQMSLPVSDLAVAFDTASKLSAERAMTSSPVIWKIKRFLNLGSEKKLKKAINVVNELAKDMINNRREMGFSTRRDLLSRFMGSVNDDDKYLRDIVVSFLLAGRDTVASGLTCFFWLLSNHPKVEALIREEVDRVMIPKQNSVQGFASFEQLREMQYLNAAIYESMRLYPPVQFDSKFAHEDDVLPDGTFVRKGTRVTYHPYAMGRMERVWGLDCLEFRPERWLKDGVFVPENPFKYPVFQAGVRVCLGKELALVEMKAVVAALVGRFDIRVVGLHSEPQFAPGLTATLRGGLPVQVSERCS* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3604 502 Pfam Cytochrome P450 86 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PANTHER CYTOCHROME P450 94C1 19 499 - -
Lja3g3604 502 PANTHER CYTOCHROME P450 19 499 - -
Lja3g3604 502 Gene3D Cytochrome P450 41 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 SUPERFAMILY Cytochrome P450 62 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g3604 502 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3604 Lja-Chr3 71400292 71401946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3604 34 500 Cytochrome P450 AT2G27690 62.737 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3604 K20624 - gmx:100813091 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3604 3 71400292 71401946 Lja3g3604 3 71400292 71401946 ECH
Lja3g0959 3 9848665 9850502 Lja3g3604 3 71400292 71401946 ECH