Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3599 ATGGCGGAAGAACACAGGTGCCAGGCTCCGTTATTCTGCGCGAACAATTGCGGTTTCTTCGGGAGCGCGGCGACGGAGAATCTCTGTTCCAGGTGCTACCGCGATCTGCAGCTCAAGGAGCAACAGGCTTCATCAGCGAAGCAGGTTCTCAACCAGTCGCTCGCGCTTCCGGCTCCGGTGGTGATTTCCGAGCCGGCGGCGGCTTCTTCTTCGTCGGTTGTTGCGTCGCCACGCGCCGTGGAGGAGGTGAAGCCGAATGGGCCGAGCCGGTGCGTGACGTGCAGGAAGCGCGTGGGGCTCACGGGGTTCAAGTGCCGGTGCGGGATGACGCTGTGTGGGGTCCACCGTTACCCGGAGCAGCATGATTGTGAGTTCGATTTCAAGGGTTTGGGGAGGGACCAGATCGCGAAGGCGAATCCGGTAGTGAAGGCGGAGAAGCTTGAGAAGATCTGA 453 0.6115 MAEEHRCQAPLFCANNCGFFGSAATENLCSRCYRDLQLKEQQASSAKQVLNQSLALPAPVVISEPAAASSSSVVASPRAVEEVKPNGPSRCVTCRKRVGLTGFKCRCGMTLCGVHRYPEQHDCEFDFKGLGRDQIAKANPVVKAEKLEKI* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3599 150 ProSiteProfiles Zinc finger AN1-type profile. 85 131 IPR000058 GO:0008270
Lja3g3599 150 Pfam AN1-like Zinc finger 93 127 IPR000058 GO:0008270
Lja3g3599 150 SMART AN1_Zf_4 91 128 IPR000058 GO:0008270
Lja3g3599 150 Gene3D - 65 146 IPR035896 -
Lja3g3599 150 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 57 - -
Lja3g3599 150 Pfam A20-like zinc finger 13 34 IPR002653 GO:0003677|GO:0008270
Lja3g3599 150 Gene3D - 1 55 - -
Lja3g3599 150 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 150 - -
Lja3g3599 150 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Lja3g3599 150 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Lja3g3599 150 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 150 - -
Lja3g3599 150 SUPERFAMILY AN1-like Zinc finger 80 145 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3599 Lja-Chr3 71285462 71286584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3599 1 150 C2H2 Transcription Factor Family AT3G52800 50.867 7.19e-46 145