Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3592 ATGATGAAAAGAATTAAACATTGTCTTAAGTTATTTACTCAAAACTCACAAGGTCACACAAGGAAAATCTGCAGAGGTTTCTGTCAGGGAACTCAGCTTACTCCAAATTCAATTGATGATTTTCCTGTGGTTTCACCAAGAATCAGGCTTAGAGATGGGAGGCACCTGGCTTATGTTGAGAGAGGAGTCCCCAAGGACATGGCAAAATACAAGATCATCATTGTGCATGGATTTGGAAGCTCTAAAGAGATGAATTTTCTGGCTCCCCAAGAATTAATAGATGAACTGGGTATATATCTTCTGCAATATGACCGGGCTGGATATGGAGAGAGTGATCCAAACCCCAAGCGCTCACTGAAAAGTGAGGCACTTGATATTCAAGAGCTTGCTGATCAGCTAGAGGTAGGAGCTGAGTTTTATGTGATTGGAGTCTCAATGGGATCATATGCTACTTGGAGTTGTCTCAAGTACTTGCCAGACAGGCTTGCAGGGTTGGCGCTGATAGCCCCGGTCATCAATTACAGGTGGCCTTCCCTTCCTGGGAGTCTGATAAGAGAGGACTACAGGAGGAAGCTTGTGAAGTGGGCACGGTGGTTTGCAAATCACTGTCCTACTCTTTTGCATTGGTGGGTGACTCAAAAATGGCTCCCTTCAGCTGCTGTCATAGAAAAAAACCCAGCATTCTTCAACAAAAGTGATATAGATATTTTAAAGACAATTTCAGGGTTCCCAATGTTTACAAAGGACAGTTTAAAGGAACAAGTTGTTTTTGACACACTTCGCCATGATTGGAGGGTAGCTTTTGGAAAATGGGAATTTGACCCTATGAAGCTAAGTAATCCATTCCCTCACAAGACAATTATTTTTGACAGAATGACCCTAGAATCAGAGCAAGAGGTTCCAATGCAAGAACCAGAACCTACATTTCCTCAATTGGGCAAACAGAACTCAATTCTGTCACTTACCCTTGATGAGTTCCAAAGCAAGAGTGGGAGGAGCTTTGGTTCCATGAACATGGATGAATTCCTGGCCAGCATTTGGAACTCAGATGATAACCAACTCAACAATCCACCACCTGCTCGTGATGAAGTCGCTGAGACGACTCAGAGTAAAAGTGTTGCAATTGCAGCAGAACACACCATTTCCCAGCAAGGCTCAATCTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTGTGGTCTGAGATCCATAAAGACCACCCACAAAGGAATGAAGCAAACAACAACAATCTTGGAAGAAATGAGACACTTAGGAAGCAACAAACACTTGGGGAGATAACTTTGGAGGATTTCCTAATAAAAGCTGGGGTAGTACAAGAATCATCATCACTATTCAATTCTACACCTCAACTTAGAACTACAATGCCATCTCAGAATCAGATTGGTAATGCTGCAAGTTATGGATTGAGGCCTGCAATTGGGATAGGATTTTCTACCCAACATAATATAGGGACCAGTTTAATGTTGTCACAGAATAACAGCCTAGTAGCAATGGATCCCTCTAAAAGTCATGCAGTAGAAAAATGTCAAAGCTTGCCGGAGTCAAGTGGGTGTAATAGAAGCAAGAGGATAATTGATGGTCCTCCTGAAGTGGTATTGGAGCGAAGGCAACGCAGAATGTTGAAAAATCGAGAATCCGCAGCACGTTCTCGAGCTAGGAGACAGGCATACACAGTAGAGCTAGAAGCAGAGTTGAATCTGCTACAACAAGAGAACGACAACCTAAAAGAAATTCTGGCTGAAGCCGAGCGTAAGAGAAAACAAGAGATTTTACAGAGAAAGCATTCAACAGCAGCTCAGAAGAGGACAGAAAAATTGAGGGCAATAAAGAGGCCATTAAGCACAACCTGGTGA 1881 0.4285 MMKRIKHCLKLFTQNSQGHTRKICRGFCQGTQLTPNSIDDFPVVSPRIRLRDGRHLAYVERGVPKDMAKYKIIIVHGFGSSKEMNFLAPQELIDELGIYLLQYDRAGYGESDPNPKRSLKSEALDIQELADQLEVGAEFYVIGVSMGSYATWSCLKYLPDRLAGLALIAPVINYRWPSLPGSLIREDYRRKLVKWARWFANHCPTLLHWWVTQKWLPSAAVIEKNPAFFNKSDIDILKTISGFPMFTKDSLKEQVVFDTLRHDWRVAFGKWEFDPMKLSNPFPHKTIIFDRMTLESEQEVPMQEPEPTFPQLGKQNSILSLTLDEFQSKSGRSFGSMNMDEFLASIWNSDDNQLNNPPPARDEVAETTQSKSVAIAAEHTISQQGSISVPPPICKKTVDEVWSEIHKDHPQRNEANNNNLGRNETLRKQQTLGEITLEDFLIKAGVVQESSSLFNSTPQLRTTMPSQNQIGNAASYGLRPAIGIGFSTQHNIGTSLMLSQNNSLVAMDPSKSHAVEKCQSLPESSGCNRSKRIIDGPPEVVLERRQRRMLKNRESAARSRARRQAYTVELEAELNLLQQENDNLKEILAEAERKRKQEILQRKHSTAAQKRTEKLRAIKRPLSTTW* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3592 626 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 547 562 IPR004827 GO:0003700|GO:0006355
Lja3g3592 626 MobiDBLite consensus disorder prediction 598 618 - -
Lja3g3592 626 SUPERFAMILY Leucine zipper domain 544 592 IPR046347 GO:0003700|GO:0006355
Lja3g3592 626 MobiDBLite consensus disorder prediction 349 369 - -
Lja3g3592 626 Coils Coil 567 601 - -
Lja3g3592 626 Gene3D alpha/beta hydrolase 44 281 IPR029058 -
Lja3g3592 626 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 2 581 - -
Lja3g3592 626 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 542 594 IPR004827 GO:0003700|GO:0006355
Lja3g3592 626 Pfam Serine aminopeptidase, S33 69 207 IPR022742 -
Lja3g3592 626 Pfam bZIP transcription factor 544 595 IPR004827 GO:0003700|GO:0006355
Lja3g3592 626 Gene3D - 542 596 - -
Lja3g3592 626 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 2 581 - -
Lja3g3592 626 SMART brlzneu 540 604 IPR004827 GO:0003700|GO:0006355
Lja3g3592 626 SUPERFAMILY alpha/beta-Hydrolases 39 216 IPR029058 -
Lja3g3592 626 MobiDBLite consensus disorder prediction 598 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3592 Lja-Chr3 71156241 71162445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3592 302 626 bZIP Transcription Factor Family AT3G44460 46.084 2.49e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g3592 Hydrolase_4 5.9e-10 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3592 - - gmx:100809863 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3592 3 71156241 71162445 Lja3g3592 3 71156241 71162445 ECH