Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3591 ATGTACCATCATCACCAACACCAAGGAAAAAATATCCATTCTTCTTCCCGAATGCCGATCCCATCAGAGAGACACATGTTCCTTCAAACAGGAAATGGGTCTGGTGATTCAGGACTTGTGCTCTCAACTGATGCTAAGCCTAGATTGAAATGGACACCTGATCTTCATACCAGGTTTATAGAAGCAGTCAATCAGTTAGGTGGAGCTGACAAGGCTACTCCGAAAACGGTAATGAAACTCATGGGGATTCCTGGGCTGACCTTATACCATCTAAAGAGCCATCTTCAGAAGTACAGATTGAGCAAGAATCTGCATGGACAAAGCACCAACGTGACACAAAAAATAAGTGCAGGAACTGCGGAGAGACTTGCTGAACCCAGTGGAACTCACATGAACAAATTAAGCCTTGCACCGCAGCCTAACAAAGATCTACATATTGGCGAGGCACTGCAGATGCAGATTGAAGTTCAGAGAAGGCTCAATGAACAACTAGAGGTACAGAGACACTTGCAGCTTCGTATAGAGGCACAAGGGAAGTACCTTCAGTCTGTGCTGGAGAAAGCTCAGGAAACTCTTGGAAGACAGAATTTGGGAATAGTAGGACTAGAAGCTGCCAAAGTTCAACTCTCGGAGCTCGTGTCTAAAGTATCTTCTCAGTGCCTGAACTCGGCATTTTCAGAGCTGAAGGAACTACAAGGATTTTGCCCGCAGCAAAACCAAACCAATCAACCAAACGACTGCTCCATGGACAGCAGTTGCCTCACATCCTCTGAGAGATCACAGAAGGAGCAAGAGATTCAAAATGGAGGCCTTGGCATGAGACCCTTCAATGGTCATGTGTTCATGGAACAACGAAAGGAAACCGCGACAACAGAACTTCCTCACCTTCGAAACGCAGAACTCAAGTGGCATGATGAAGTGAAAAAGAACACCTTTCTCACCCCATTGGGGAAGAACGAAGAAAGAATTACTTATGCTGTAGAAAGCAGTTCTAACAACTTATCTATGACAATTGGACTTGAAAGAGAAACACAGAATGGCATCAGCATGTATCCTGAAAGAGTAATCAGGGAAGGCAACTCAGATGGTCATGAATTCCAGCACAGGAACAGCAACATGACAGAAAAATTGAAACCAGTGGATGAGAGGTTGCCTTCTTACTTTGCAGCAGCAAGATTGGACTTAAACACTGAAGCTGCAACCAGTTGTGGTAAGCAACTGGACTTGAACAGATTCAGTTGGAACTGA 1248 0.4471 MYHHHQHQGKNIHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHTRFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSTNVTQKISAGTAERLAEPSGTHMNKLSLAPQPNKDLHIGEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQNQTNQPNDCSMDSSCLTSSERSQKEQEIQNGGLGMRPFNGHVFMEQRKETATTELPHLRNAELKWHDEVKKNTFLTPLGKNEERITYAVESSSNNLSMTIGLERETQNGISMYPERVIREGNSDGHEFQHRNSNMTEKLKPVDERLPSYFAAARLDLNTEAATSCGKQLDLNRFSWN* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3591 415 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Lja3g3591 415 Pfam MYB-CC type transfactor, LHEQLE motif 145 191 IPR025756 -
Lja3g3591 415 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Lja3g3591 415 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Lja3g3591 415 PANTHER MYB-RELATED PROTEIN 2 4 415 - -
Lja3g3591 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Lja3g3591 415 Gene3D - 45 103 - -
Lja3g3591 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 415 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3591 Lja-Chr3 71129895 71133082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3591 78 415 G2-like Transcription Factor Family AT3G04030 52.890 4.48e-100 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lja3g3591 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3591 - - gmx:100810396 656.751