Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3582 ATGCCTGCTAAAGCAACTCTGTTTGACAAGAACTGCAATCCTCTACTGGAGCTTGGAACTGGTCCTTACAATACTATTCGATGGAATCCAAAGGGAAGATTTTTATGTTTGGCTGGCTTTGGTAACTTACCTGGTGATATGGTGTTCTGGGATTACGCGGATAAGAAACAGCTCGCAGCAACTAAGGTTGAATGGTCTGTTACAAGTGAATGGTCTCCGGATGGGTGCTATTTCATGACAGCGACAACAGCTCCGAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTACAATGGATCATTGTACTTCAAGAAGATGTTTGACAAGTTGTTCCAGGCTGATTGGAAACCAGAGTCGCCAAGTAAGTTTGGTGACATCGCTGAATTAATCAAGTCTATAGACTCTGTAAAACTTGAAGATAAAAAACCATCAGGTCAAGGACCAAAACCTACCCAGGCTTCTACAAAAGCCTCATCTGCCAACCCCCCTGCGCAAAAACCCGCTGCCTATTGCCCACCACTTGCTAAGACTGCAGCTGTTATTCAGGCACAGCTACTTGGAGAGAGCCCTTCAGAAACATTGAGCAAGAATGCTTTACGAAACAAGGAAAAAAGGGAGAAGAAAAAGGCGGCTACAGATGCCAGTTCTTCATGA 657 0.4429 MPAKATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAATKVEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLFQADWKPESPSKFGDIAELIKSIDSVKLEDKKPSGQGPKPTQASTKASSANPPAQKPAAYCPPLAKTAAVIQAQLLGESPSETLSKNALRNKEKREKKKAATDASSS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3582 218 MobiDBLite consensus disorder prediction 187 218 - -
Lja3g3582 218 MobiDBLite consensus disorder prediction 148 163 - -
Lja3g3582 218 MobiDBLite consensus disorder prediction 198 218 - -
Lja3g3582 218 SUPERFAMILY WD40 repeat-like 16 99 IPR036322 GO:0005515
Lja3g3582 218 Pfam Eukaryotic translation initiation factor eIF2A 1 114 IPR013979 -
Lja3g3582 218 MobiDBLite consensus disorder prediction 138 172 - -
Lja3g3582 218 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 1 216 IPR011387 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3582 Lja-Chr3 70988599 70992084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3582 24 122 Eukaryotic Initiation Factors Gene Family AT5G27640 30.303 1.31e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3582 K15026 - lja:Lj0g3v0307769.1 435.261