Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3574 ATGGGAGACGTGGCTAAGGACCTCGCAGCTGGGACTGTTGGAGGGGCATCACAATTGATAGTTGGACACCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCCGGTCAGCCTCCCAAGTTTTCTGGTGCATTTGATGCCGTCAAGCAGACAATAGCAGCTGAAGGTCCGAGGGGTTTATTCAAAGGTATGGGTGCCCCGCTTGCTACGGTAGCAGCCTTCAATGCTGTCCTGTTTACAGTGAGGGGACAAATGGAAACAATAGTGAGGTCCCATCCTGGTGCTCCCCTCACAGTCAGTCAGCAGTTTATTTGTGGAGCTGGAGCTGGAGTTGCTGTTTCCTTTCTTGCTTGCCCAACTGAATTAATCAAATGCAGGTTGCAAGCACAAAGTGCACTTGGTGGCTCCGGAGCAGCTGTTGTGGCTGTTAAGTACGGAGGACCCATGGATGTGGCCAGGCAGGTTCTCCGGTCAGAGGGGGGGACGAAAGGTCTTTTCAAGGGCTTGGTTCCCACCATGGCACGTGAGATACCTGGAAATGCTATCATGTTTGGTGTATATGAAGCAATAAAGCAACGGATTGCCGGAGGCACTGATACTTCTGGACTAGGTAGAGGTTCTCTGATTGTTGCAGGAGGCTTGGCTGGAGCTTCCTTCTGGTTCCTGGTTTACCCAACTGATGTTGTTAAAAGTGTGATTCAAGTAGATGACTACAAAAACCCAAAGTTTTATGGCTCATTAGATGCTTTCAGAAAGATTCAAGCTACACAGGGGTTCAAAGGCCTTTATAAAGGTTTTGGTCCTGCAATGGCCCGAAGTATTCCTGCAAATGCCGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCATTGGGATGA 894 0.4955 MGDVAKDLAAGTVGGASQLIVGHPFDTIKVKLQSQPTPLPGQPPKFSGAFDAVKQTIAAEGPRGLFKGMGAPLATVAAFNAVLFTVRGQMETIVRSHPGAPLTVSQQFICGAGAGVAVSFLACPTELIKCRLQAQSALGGSGAAVVAVKYGGPMDVARQVLRSEGGTKGLFKGLVPTMAREIPGNAIMFGVYEAIKQRIAGGTDTSGLGRGSLIVAGGLAGASFWFLVYPTDVVKSVIQVDDYKNPKFYGSLDAFRKIQATQGFKGLYKGFGPAMARSIPANAACFLAYEMTRSALG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3574 297 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Lja3g3574 297 Pfam Mitochondrial carrier protein 102 199 IPR018108 -
Lja3g3574 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Lja3g3574 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Lja3g3574 297 Gene3D Mitochondrial carrier domain 98 296 IPR023395 -
Lja3g3574 297 Gene3D Mitochondrial carrier domain 2 97 IPR023395 -
Lja3g3574 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lja3g3574 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Lja3g3574 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Lja3g3574 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Lja3g3574 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3574 Lja-Chr3 70804962 70806464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3574 22 296 Antiporters AT1G79900 33.214 4.13e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3574 K15109 - gmx:100787304 516.538